| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0993 |
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| Symbol | |
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| ID | 3366487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1125648 |
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| End bp | 1128410 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637651336 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_234087 |
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| Protein GI | 66044246 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.962183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC AACGATTCCT ACACGAGCCG GCCATGACTG ATCTGTCCCG AATGCAAGGG
TTTGCAGACG GCGCGATTCC TGCGTTGGAA GGGCGGTTTT TCCGTCCACC TCTGCCTGAG
GGTTATGTTC CCCGTGCGCG CCTGTGTCAG CGTCTCGATG CCGGGCTTGG CGGCCGACTG
CTGCTGGTCT GCGCCCCGGC CGGGTTCGGC AAGAGTTCGC TGGCTGTCGA GTTCTGTCAG
GGGTTGCCGG ACAACTGGCA AAACGTATGG CTGGGTCTGA GCGCGCGGGA CAGCGACCCG
GGTCGTTTTC TCGAGCGTTT GCTGGCCAGC CTTCAACAGT TCTTCCCGCA ACTGGGTACT
CAGGCGATGG CTTTGCTGAA GATGCGCCAG CGCCACCAGC CGTTTGCCTT CGAGGAGTGG
CTCGACGGCC TGCTCGACGA GTTGGCCATG CACCTGATGC TGAGCAAGCC GCTGTTGCTA
GTGCTCGATG ACTATCATCT GGCCCAGGGG CCGGTACTCG ATCGCTGCCT GCAGTTCCTT
CTCAACCATC TACCGGCCGG GCTGGTGGTC ATGGTGACCA GCCGGCAGCG CCCGGACTGG
CATCTGGCAC GCTTGCGTCT GACGCGGCAG TTGCTGGAAA TCAACGAACA GGACCTGCGC
CTCACGCACG CCGAATCCAT GGCAGTGCTG GAGCGGCACA GCGGATCGCT CGACAGCGAG
GCGTTGCAAA GCCTGATTCA GCGCAGCGAA GGCTGGGTCG CCGGGCTGCG CTTCTGGTTG
CTGGCGGCGT CCGAAGCCGG TGATGAAAGC GCCTTGCCCC AGACGCTGCG CGGCAGTGAG
GTGCTGATTC GCGAGTACCT GCTGGAAGAA GTGATCGACT GCCTGCCGGC CGATGTTCAG
GCGTTTCTCT ACGACACCGC CTGCCTGGAG CGTTTTTGCG CCGAGCTGTG CGACGCCGCG
CGGGATGGTC ACGACAGCGC CGGGATGCTG GGTTATCTGC AGGCGCATCA GGTCTTTCTG
GTACCGCTGG ACGAGCAGGG CCACTGGTTT CGCTACCACC ATCTGTTTTC CGATCTGTTG
CGCGCTCGGC AGGCGGCCGG TGCACCACCG ACCCGCCTGC ACCTGAATGC CTGCCGCTGG
TTCAGCGCTC AGGGCCAACT CGACGAAGCG GTCGAGCAGG CGTTGCGCGC CGGGCATCTG
GATGTGGCCG CCAATCTGGT GCAGAACCTC TCCGAAGAAC AGCTGCTGGC CGAACAGAAT
GTCGGCATGT TGCTGCGCTG GAAGATGGAC TTGCCGGACG ACCTGCTGAC CAGCACGCCA
CGCCTGATCG TGCTCTACGC CTGGGCGCTG GGGCTGGCCT GCCAGCTGGA TGCCGCCGAA
GAGCTGGCCA ATCAACTGAG CCGCTTTCTG CCGGCGCCCT CGGCAACCGC TCAGAAATCC
ATGCTCGCCC AATGGCTGGC GCTCAGCGGC ATCATCGCCC GTGGCCGCGG AGACAGTGAA
AAGACTCAAC ATTATTGCAC CGAAGCCCTG CTGAGCCTGC CGGAAAAACG CTATGGGCAG
CGGCTGGTGT GCTTGTCGAC ACTGGCCAAC CTCGCGGTCG CCAACGGTGA TCTGTGGCGC
GCCCGCGTGT TGAATCGCGA TGCGCTAGAG CTGGCGCAAC GGGTCGCCAA TCCGTTGTTC
GAGGCGCTGG CGCATTATGA CCGCGCCAGA GTTCTGCAGG CGCGTGGCGA AATTCTCCGC
GCGCTGGAGG AAGTGCGGCA GGGGCAGCAA CGCCTCAAAG ACTTGTCCAC CGTTCGGCTC
TACGCGGTCC GCGCGCGCCT GACGCTGTAT GAAGGCTACT TGCTGACCCT GCGTCTGCAG
GTGGACGAAG GGCGGGTGTT ATTGCTGGCC GGTCTGGCCG AGGCACGCGC CTGCCGCGAC
ATCAGCGTGC TGATCGGTCA CTGTGTAATC GCCACCATGG AAGGCTGCAC CGGCCGCTTT
GCCGAAGCCT TCGCCGAACT CGCCGAGGCC GAACGGCTGA TGCACATCTG GGACGTGCCG
CCGATTTACT ACCTGGCGAT GATTACCCTG GTCAAATGCG AGCTGTGGCT GTTGCAGGGG
CGCATGGACC TTGCCGAAGC GTGGCTGCTG CGCCTGACGC AGACCTACAA CGGCGGTCTC
GGTGCTGCGG CCCCCGAGTG CCATCCGCAA CTGCCGCAAC ACATTGAGTT GCAGCGTGCC
GTACTCGAAC GACAGCAGGG TGACGGCGTT GCCTGCGAGC AGCGCTTGCA GGCGCTCGAG
CGGCGCGCTC AGGAGGTGGG GGCGAAACTG CTTGGACTGA TCGCCATGAC CCAGCAGATC
GGCTTGCTGC TGAGTCAGGC GCGACGCGAC GAGGCGCGGG CATTGTTGCT GCGCAGCCTG
CCCGCAGCGT CCGGCGGTGC ATTGATGCCG TTCAACGCGC TGCTGGGCGA GCACCCCGAG
TGGCTGCATG AGCAACTTGT GCAACTGCCA CCCTGCCGGG TTCAAGCTGC ATTGCTGGAA
AAGCTTCCGG CCTGTTGCAC GCCGTCGCCC GAGGCGGCAC ATGGCGGCGA TTGCCTCAGC
GTGCGCGAAC TGGGTGTGCT GCAACTGATT GCACAGGGCT GTTCCAATCA GGAAATCAGC
GAGCAGCTGT TCATCTCCCT GCACACCGTC AAGACTCACG CCAGTCACAT CAACAGCAAA
CTGGGGGTCG AGCGTCGCAC TCAAGCGGTG GCGCGGGCCA AGACACTGGG CTTGCTGGGT
TGA
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| Protein sequence | MPKQRFLHEP AMTDLSRMQG FADGAIPALE GRFFRPPLPE GYVPRARLCQ RLDAGLGGRL
LLVCAPAGFG KSSLAVEFCQ GLPDNWQNVW LGLSARDSDP GRFLERLLAS LQQFFPQLGT
QAMALLKMRQ RHQPFAFEEW LDGLLDELAM HLMLSKPLLL VLDDYHLAQG PVLDRCLQFL
LNHLPAGLVV MVTSRQRPDW HLARLRLTRQ LLEINEQDLR LTHAESMAVL ERHSGSLDSE
ALQSLIQRSE GWVAGLRFWL LAASEAGDES ALPQTLRGSE VLIREYLLEE VIDCLPADVQ
AFLYDTACLE RFCAELCDAA RDGHDSAGML GYLQAHQVFL VPLDEQGHWF RYHHLFSDLL
RARQAAGAPP TRLHLNACRW FSAQGQLDEA VEQALRAGHL DVAANLVQNL SEEQLLAEQN
VGMLLRWKMD LPDDLLTSTP RLIVLYAWAL GLACQLDAAE ELANQLSRFL PAPSATAQKS
MLAQWLALSG IIARGRGDSE KTQHYCTEAL LSLPEKRYGQ RLVCLSTLAN LAVANGDLWR
ARVLNRDALE LAQRVANPLF EALAHYDRAR VLQARGEILR ALEEVRQGQQ RLKDLSTVRL
YAVRARLTLY EGYLLTLRLQ VDEGRVLLLA GLAEARACRD ISVLIGHCVI ATMEGCTGRF
AEAFAELAEA ERLMHIWDVP PIYYLAMITL VKCELWLLQG RMDLAEAWLL RLTQTYNGGL
GAAAPECHPQ LPQHIELQRA VLERQQGDGV ACEQRLQALE RRAQEVGAKL LGLIAMTQQI
GLLLSQARRD EARALLLRSL PAASGGALMP FNALLGEHPE WLHEQLVQLP PCRVQAALLE
KLPACCTPSP EAAHGGDCLS VRELGVLQLI AQGCSNQEIS EQLFISLHTV KTHASHINSK
LGVERRTQAV ARAKTLGLLG
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