Gene PSPA7_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3548 
Symbol 
ID5353915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp3677696 
End bp3680470 
Gene Length2775 bp 
Protein Length924 aa 
Translation table11 
GC content66% 
IMG OID640812598 
Producttranscriptional regulator 
Protein accessionYP_001348902 
Protein GI152986923 
COG category[K] Transcription 
COG ID[COG2909] ATP-dependent transcriptional regulator 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAT CCCACGGAGA TTTGGCTCCG TACCACAATG ATAATGACAC AGGGATACAG 
GCCGTGGATG CAGTACAGGA TCCAGCAGCC GGCAGCCTTT CGCGCTCCAG AATAGTGCCG
CCTCAGGTGC CAGCCGAATA TTCTCTTCGC CCCGCGATCC GCGCTCTGCT GGATCGCAAC
CCTCATTCCC GCGTTCTGAT GTTTTCCGCG CCTGCCGGCT TCGGCAAGAC CTGTGCGCTC
GCGGCCCTGG CCAGGGAGCG CACTGTAGCA GACCAGGCGG TGGCCTGGCT GTCGCTGGCC
GAGGAGGACG ACGATCCCGC GCGTTTCTGC CGGCAACTCA TCGAAGCCGT TGGCGAAGCT
GTACCGCAGT TGGGCGACGA CGCCCAGTCC TATCTGCAGA ACACCATGCG GGTACCGGTG
GTGGCGGTCA TCGAAAGCCT GCTCGGCGAG CTCAATCGCC ATGCGCGGCC CCTGCTGCTG
GTGCTGGACG ACCTGCACCT GGTGAGCAAC CCCGACATTT TCGCCGGCCT CAACCGCCTG
GTGCAGTACG CGCCACCCGG TCTGGTCCTG GCCCTGGGTA CGCGCTCGCA GCCGCCATTG
AGCCTGGCCA CCTGGCGGGC CAAGGGGCTG TTGCTGGAGA TCGGCGTCGA GGAATTGCGC
CTCGGTTTCG AGGAAACCCG CGAATACCTC GAGCGCAGCG GGCTCTACCT GGACGAGGCC
TGCCTCAAGG CGCTGCATGG CCAGACCGAG GGCTGGGTGG TCGGCGTACA TCTCGTCAGC
CTGTGGCTGC GCCAGCAGCC GCAAGTCCAG GATCAGCAGA TGGCCCTGCT GGACGGCGAC
AAGCAAGCGG TCAGCGCCTA TCTGCTGGCG GCGGTCTTCG AGCGCCTGCC CGACGACCTG
CAGCAAGCGC TGCTGGCATT GGGGGTGGCC AGCCAGTTGA GCGGTGACCT GGCCAATGCC
CTGACCGGGC GGCAGGACGG CCAGGCGCTG CTGGAACGCC TGGAATCCAT GCAGCTCTTC
CTCCTGCCGC TGGATCGCGA GCGGCAGTGG TATCGCTTCC ACCTACTGTT CGCCGAGTTC
CTCCGTACCC GCCTGCGCGA GTCCGACCCG GACCGCTTCA AGCAACTGCA TTTCAACGCC
AGCCTGTGGT TCACCAACCA CCACATGCCC ACCTTCGCCA TCGAGCACGC CTGCGCCGCG
GAGGATCCGG AAATGATCGC CGCGCTGGTC GACGGTTGCG GCCTGGAGCT GATCAACCGC
GGGCAGCTCA GCCTGATCTA TCGTTGGCGC AAGCACGTGC CGGACGAAAT TGCCGAACGT
TATCCGATCC TGGTGCTCAC CGATGCCTGG TCGCGCGCCA GCGACCTGAG CCTGGGCGAC
GCCAACCGGA TCATCGACGA GCTGCTCGCG CGTTGGGGCG AAAGTCGCGG CGACGGTCCG
ATGGGCGACC AGTACCTGTC GGCGCTGGCG GTGAAAGCCG TGGTCGCGCT GCAGAAGGAT
GACCTGGAAC TGTGCATCTC CCTGGCGCGC CGGGTGGAGG TACAGCTCGG CCAGAACGCC
GCCTTCCTCG AAGTGGCTGT TCTGATCACC GCCGCGCTGG CCCAGGTGGT GCGCGGCCAG
GCCGACCAGG CGCGACGTCT GCTGGGGCTG GCGCAGCAGC GCAATCATTT CCTCGAAGGG
CGCTACCTGG ACATGCAGCT GGCCAACGTC GAGGTGATCC TGGCCCTGGA GCAGGGCCAG
GTGAAGCAGG CGCAACTTCT CATCGAGCGG CTCCGGCAGC GCGCCCAGCC TCTGTTCGAG
AAGTCCAGGA GCGCCCTGGC CCTGCCCACC ATCACCGAAG CCCTGACCGC CTACTACCGG
GTCGAGCTAG AGGGCCTCGA GGAGCGTCTG GGCTGGGCGC TGGGACATGT GGACGTGATC
AACCCGATCG ACTTCTATGC CCAGGGACAG ATCTGCCTGG CGCGCACCCA GCGTCTGCTC
GGCCGCCCGA AGGAGGCGCT GGCCAGCCTT GCGGCGATGC AGGCCCTGGC CTCGCGCAAC
CAGTCGTGGC GTTTCTTCGC CCAGGCCATG GCCGAGGAAA TCAACCTGAT CCTCCAGGAC
GTCGGGCCCG ATCGCCTGAA GCGCGCCGAG CAGCGGCTGA AGAGCGTGGA CTGGAACAAG
ATGGCCGCGC ACTACCGCAA CATGGCCTTC AACCCGGTCA ACTGGTCGCT GGGCGTGACC
CGTGTGCGCC TGTTGCAGGG GCGCGGGCAT TTCAGCGAAG CCTTGCACGA GATCACTCAG
TTGCGCGGCA CCCTGCAGCC CGGCTGGCAC GGCCTGCAGC GTCTGCGCCT GGACATCCTG
GCGGCGCTCA GCTACCAGCG CCTGGGCTAT CAGGAACGGG CCAACAGCCT GCTCGGCGAA
TGCCTGATCA ACGCCGAGCG CGAAGGGGTG CGCAGCCTCT TCGTCGAAGA GGGCGAGGGA
ATCCGCCAGT TGCTCCAGCA GCTCGAGTCC ACCGAGCGCC AGCCGGCATT GCAGGCGTTC
ATCCGCGGCC TGCTCGGCAT CTGGCCGGGG CAGGGCGTGC GCAAACCCCA GGATGCGCTC
GAGGAAGGAC TGACGGAGCG CGAGCGCGAA GTGGTCTGCC TGGCCGCACA GGGTCTATCC
AACGAAGAAA TAGGCCAGCG CCTGTCGCTG GCCCTGGGGA CCGTCAAATG GCATCTGCAC
AACATCTACG AAAAGCTCAA GGTGCGCAAT CGCACCCAGG CGATCCGGCG GGCCCGCGAA
TTGAGCCTGC TCTGA
 
Protein sequence
MEISHGDLAP YHNDNDTGIQ AVDAVQDPAA GSLSRSRIVP PQVPAEYSLR PAIRALLDRN 
PHSRVLMFSA PAGFGKTCAL AALARERTVA DQAVAWLSLA EEDDDPARFC RQLIEAVGEA
VPQLGDDAQS YLQNTMRVPV VAVIESLLGE LNRHARPLLL VLDDLHLVSN PDIFAGLNRL
VQYAPPGLVL ALGTRSQPPL SLATWRAKGL LLEIGVEELR LGFEETREYL ERSGLYLDEA
CLKALHGQTE GWVVGVHLVS LWLRQQPQVQ DQQMALLDGD KQAVSAYLLA AVFERLPDDL
QQALLALGVA SQLSGDLANA LTGRQDGQAL LERLESMQLF LLPLDRERQW YRFHLLFAEF
LRTRLRESDP DRFKQLHFNA SLWFTNHHMP TFAIEHACAA EDPEMIAALV DGCGLELINR
GQLSLIYRWR KHVPDEIAER YPILVLTDAW SRASDLSLGD ANRIIDELLA RWGESRGDGP
MGDQYLSALA VKAVVALQKD DLELCISLAR RVEVQLGQNA AFLEVAVLIT AALAQVVRGQ
ADQARRLLGL AQQRNHFLEG RYLDMQLANV EVILALEQGQ VKQAQLLIER LRQRAQPLFE
KSRSALALPT ITEALTAYYR VELEGLEERL GWALGHVDVI NPIDFYAQGQ ICLARTQRLL
GRPKEALASL AAMQALASRN QSWRFFAQAM AEEINLILQD VGPDRLKRAE QRLKSVDWNK
MAAHYRNMAF NPVNWSLGVT RVRLLQGRGH FSEALHEITQ LRGTLQPGWH GLQRLRLDIL
AALSYQRLGY QERANSLLGE CLINAEREGV RSLFVEEGEG IRQLLQQLES TERQPALQAF
IRGLLGIWPG QGVRKPQDAL EEGLTERERE VVCLAAQGLS NEEIGQRLSL ALGTVKWHLH
NIYEKLKVRN RTQAIRRARE LSLL