| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4439 |
|---|
| Symbol | |
|---|
| ID | 4113268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 4719542 |
|---|
| End bp | 4720399 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638033585 |
|---|
| Product | ATP-dependent transcription regulator LuxR |
|---|
| Protein accession | YP_641599 |
|---|
| Protein GI | 108801402 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGTCCG TGAGCCCGTG GGTCCCGTCG CTGCTGCGAC CGCGCGACGC CGACGCCCTG
CGCGCCGAAC TGCGCCGAAT CGCGTCGATG ACGGGCCTTC CGGTGACGTT CGGCGGTGAG
GTGTTCGACC GAACGCTGCT GCTCACCGAG TTCGTCGGCG CCAGGACCAG CGGTTTGCGC
GGGCTGGCGG TCCGCCCGAA CTCGGGTCTG GGCGGGGCCA CCGTGGTGGC CGGACGTCCG
CGGTCGGTGG CCGATTACCG GCGCGACCTC ACCATCACCC ACGACTACGA CGGGCCCGTG
CTCGGCGAGG GGATCCACTC CGTGCTGGCG GTGCCGGTGG TCGTCGACGG CGAGGCCCGC
GCGGTGCTCT ACGGGGCGCA GCGGTCCCCG TCGCCGATCG CCGACCAGAC CGCGGACTTC
ATCGTGGCCT CGGCCCGCCG CCTGAGCGCC GAACTGCGGA TCCGCGACGA GGTGGACCGC
CGTCTGCGGT TGCGGGAGGC GGCCCTGGCC GGTGCCGGGG CGGGATTGGC CGGTACCGAA
GAGGTGCGTG AGGTGCACGC CGAACTGCGC CGGCTGGCCG CGGACTCCCC CGACGGGGCG
AAGCTGCGCG AGCTGGCCGA CCGGCTGGCA CACGCCCTCG GCGGCGACGC CCCCGCCGTC
GAGACCCCGC TGAGCGGGCG CGAACTCGAC GTGCTGACCC AGGTCGCCAT GGGGTGCACG
AATGCCGAGG CGGCGCAACG GCTTTCGCTG CGGCCGGAAA CGGTGAAGAG TTACCTGCGC
AGCGCGTCGG CCAAACTCGG CACGCGGACC CGCCACGAAT CGGTGTCCCG GGCGCGGCTG
CTGCGGCTCA TCCCCTGA
|
|---|
| Protein sequence | MLSVSPWVPS LLRPRDADAL RAELRRIASM TGLPVTFGGE VFDRTLLLTE FVGARTSGLR
GLAVRPNSGL GGATVVAGRP RSVADYRRDL TITHDYDGPV LGEGIHSVLA VPVVVDGEAR
AVLYGAQRSP SPIADQTADF IVASARRLSA ELRIRDEVDR RLRLREAALA GAGAGLAGTE
EVREVHAELR RLAADSPDGA KLRELADRLA HALGGDAPAV ETPLSGRELD VLTQVAMGCT
NAEAAQRLSL RPETVKSYLR SASAKLGTRT RHESVSRARL LRLIP
|
|---|
| |