Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_41810 |
Symbol | |
ID | 4382963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3733152 |
End bp | 3735857 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325921 |
Product | putative transcriptional regulator |
Protein accession | YP_791486 |
Protein GI | 116049709 |
COG category | [K] Transcription |
COG ID | [COG2909] ATP-dependent transcriptional regulator |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGCAG TACAGGATCC AGCAGCCGGC AGCCTTTCGC GCTCCAGAAT AGTGCCGCCT CAGGTGCCAG CCGAATATTC TCTTCGCCCC GCGATCCGCA ACCTGCTGGA TCGCAATCCC CATTCACGCG TTCTGATGTT TTCCGCACCT GCCGGCTTCG GCAAGACCTG CGCGCTCGCC GCCCTGGCCA GGGAGCGCAC TGTAGCAGAC CAGGCGGTGG CCTGGCTGTC GCTGGCCGAA GAAGACGACG ACCCCGCCCG TTTCTGCCGG CAGCTGATCG AGGCGTTGGG CGAAGCCGTG CCGCAGCTTG GCGACGACGC CCAGACCTAC CTGCAGAACA CCATGCGGGT CCCGGTGGTG GCGGTGATCG AAAGCCTGCT CGGCGATCTC GATCGCTATG CGCGGCCGTT GCTGCTGGTG CTGGACGACC TGCACCTGGT TAGCAACCCG GACATCTTCA CCGGCCTCAA CCGCCTGGTG CAGTACGCAC CGCCCGGGCT GGTCCTGGCC CTGGGCACGC GTTCGCAGCC GGCGCTGAGC CTGGCTACCT GGCGGGCCAA GGGACTGTTG CTGGAAATCG GCCTCGAGGA GCTGCGCCTC GGCTTCGAGG AAACCCGCGA ATACCTCGAA CGCAGCGGTC TCTATCTGGA CGAGCCCTGC CTGAAGGCGC TCTATGGCCA GACCGAAGGC TGGGTGGTGG GCGTGCATCT CGTCAGCCTG TGGCTGCGCC AGCAACCGCA GGTGCAGGAA ATGGCCCTGC TCGACGGCGA CAAGCAGGCG GTCAGCGCCT ATCTGCTGGC GGCGGTCTTC GAACGCTTGC CTGGCGACCT GCAGGAAGCG CTGCTGGCCC TTGGCGTTGC CAGCCAATTG AGCGGCGACC TGGCCAACGC CCTGACCGGG CGCCAGGACG GCCAGGCGCT GCTGGAGCGC CTGGAGTCCA TGCAATTGTT CCTCCTGCCG CTGGATCGCG AACGCCAGTG GTATCGCTTC CACCTGCTGT TCGCCGACTT CCTCCGCAAC CGCCTGCGCG ACTCCGATCC GGACCGTTTC AAGCAACTGC ATTTCAACGC CAGCCTGTGG TTCACCAACC ACCACATGCC GACGTTCGCC ATCGAGCATG CCTGTGCGGC GGAAGACCCG GAGATGATCG CCGCGCTGGT CGACGGATGC GGACTGGAGC TGATCAACCG CGGCCAGCTC AGCCTGATCT ACCGTTGGCG CAAGCATGTG CCGGACGAAA TCGCCGAGCG CTATCCGATC CTGGTCCTTA CCGATGTCTG GTCGCGGGCC AGCGACCTCA GCCTGGGCGA GGCCAACCGG ATCATCGACG AACTGCTGGC GCGCTGGGGG GAGAGCCGCG GCGACGGGCC GATGGGCGAC CAGTACCTCT CCGCGCTGGC GGTGAAGGCG GTGGTGGCGT TGCAGAAGGA CGATCTGGAA CTGTGCATCG CCCTGGCTCG CCGGGTCGAG GTCCAGCTCG GGCAGAACGC TGCCTTCCTC GAAGTGGCGG TGTTGATCAC CGCCGCGCTG GCCCAGGTGG TCCGTGGCCA GGGCGACCAG GCGCGGCGCC TGCTGGGATT GGCGCAGCAG CGCAATCATT TCCTCGAAGG GCGCTACCTG GACATGCAAC TGGCCAACGT CGAGGTGATC CTCGCACTTG AGCAGGGCCA GGTGAAGCAG GCGCAACTGC TCATCGAGCG GCTCCGCCAG CGTGCCCGGC CGCTGTTCGA GAAGTCCAGG AGCGCGCTGG CGCTGCCGAC CATCACCGAG GCCCTGACCG CCTACTACAG GATCGAGCTG GACGGGCTGG AAGAGCGCCT GGGCTGGGCG CTCGGGCATG TGGATGTGAT CAATCCGATC GATTTCTATG CCCAGGGGCA GATCTGCCTG GCGCGCACCC AGCGCCTGCT GGGACGGCCG AAGGAGGCGC TGGCCAGCCT GGCGGCGATG CAGGCCCTGG CCTCGCGCAA TCAGTCGTGG CGCTTCTTCG CCCAGGCCAT GGCCGAAGAG ATCAACCTGA TCCTCCAGGA CAGCGGCCCC GACCGCCTGA AGCGCGCCGA GCAGCGGTTG AAGAGCGTGG ACTGGAACAA GATGGCGGCA CACTACCGCA ACATGGCCTT CAACCCGGTC AACTGGTCGC TGGGCGTGAG CCGCGTGCGC CTGTTGCAGG GGCGAGGACA TTTCAGCGAG GCGCTGCACG AGATCACTCA GTTGCGCGGC ACCTTGCAGC CCGGTTGGCA CGGCCTGCAG CGCCTGCGCC TGGATATCCT GGCGGCGCTC AGCTATCAGC GCCTGGGCTA CCAGGAACGG GCCAACAGCC TGCTCGGCGA ATGCCTGATC AATGCCGAAC GGGAAGGGGT GCGCAGCCTC TTCATCGAGG AAGGCGACGG CATTCGCCAG TTGCTCCAGC AACTCGAATC CACCGAGCGC CAGCCGGCGC TACAGACCTT CATTCGCGGC CTGCTCGGCA TCTGGCCCGG GCAGGGCGTG CGCAAGCCCC AGGATGCGCT CGAGGAAGGC CTGACGGAGC GCGAGCGCGA AGTGGTCTGC CTGGCCGCAC AGGGCCTATC CAACGAAGAA ATCGGCCAGC GCCTGTCGCT GGCCCTGGGG ACCGTCAAAT GGCATCTGCA CAACATCTAC GAAAAGCTCA AGGTGCGCAA TCGCACCCAG GCGATCCGGC GAGCCCGCGA GCTGAGCCTG CTCTGA
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Protein sequence | MDAVQDPAAG SLSRSRIVPP QVPAEYSLRP AIRNLLDRNP HSRVLMFSAP AGFGKTCALA ALARERTVAD QAVAWLSLAE EDDDPARFCR QLIEALGEAV PQLGDDAQTY LQNTMRVPVV AVIESLLGDL DRYARPLLLV LDDLHLVSNP DIFTGLNRLV QYAPPGLVLA LGTRSQPALS LATWRAKGLL LEIGLEELRL GFEETREYLE RSGLYLDEPC LKALYGQTEG WVVGVHLVSL WLRQQPQVQE MALLDGDKQA VSAYLLAAVF ERLPGDLQEA LLALGVASQL SGDLANALTG RQDGQALLER LESMQLFLLP LDRERQWYRF HLLFADFLRN RLRDSDPDRF KQLHFNASLW FTNHHMPTFA IEHACAAEDP EMIAALVDGC GLELINRGQL SLIYRWRKHV PDEIAERYPI LVLTDVWSRA SDLSLGEANR IIDELLARWG ESRGDGPMGD QYLSALAVKA VVALQKDDLE LCIALARRVE VQLGQNAAFL EVAVLITAAL AQVVRGQGDQ ARRLLGLAQQ RNHFLEGRYL DMQLANVEVI LALEQGQVKQ AQLLIERLRQ RARPLFEKSR SALALPTITE ALTAYYRIEL DGLEERLGWA LGHVDVINPI DFYAQGQICL ARTQRLLGRP KEALASLAAM QALASRNQSW RFFAQAMAEE INLILQDSGP DRLKRAEQRL KSVDWNKMAA HYRNMAFNPV NWSLGVSRVR LLQGRGHFSE ALHEITQLRG TLQPGWHGLQ RLRLDILAAL SYQRLGYQER ANSLLGECLI NAEREGVRSL FIEEGDGIRQ LLQQLESTER QPALQTFIRG LLGIWPGQGV RKPQDALEEG LTEREREVVC LAAQGLSNEE IGQRLSLALG TVKWHLHNIY EKLKVRNRTQ AIRRARELSL L
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