| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5618 |
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| Symbol | |
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| ID | 5673945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6829553 |
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| End bp | 6833704 |
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| Gene Length | 4152 bp |
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| Protein Length | 1383 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641244471 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_001509875 |
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| Protein GI | 158317367 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.586723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGGCG CGGACGAACC GGACGATCGT TTCGGAACGC CCGGGTCTGC CGTGCCCCGG
GCCGGTGGGG GAGACGGGGC CGCCGCGCGG CCGCGCATCC AGCCGTCGCC GGCCGGCGAC
CTGCCGGTGG TGGGTACGAG GCTGGTACCC CCACGTCCGG TCGTCCCGCA TGTGACCCGG
CCGCGGCTGC TGGCGCTGCT CGACGAGGCG GTCGACCGGC CGCTGACCGT GGTGTGCGCA
CCGGCCGGCG CCGGCAAGAC GATGGCGCTC GCCGACTGGG CGCGATCGGG CCGGCCCGCG
CACCCGGTGG TCTGGCTGCG CGTCGACCCG ATGCTCGGAC GGCGTACCGC GCGCGCCGAG
CACCCCGGTG GCGATCCGGC GGCCAGCGGG CCGCCGTCGC CGTCGCCGTC GCAGCCGGGG
TCGCAGCCGC GGTCGCCTTC GTCCGCGCTG TCGTTGTTGC CGTTGGCGCG GAGCACGACG
CGGTGGCCTG GTCCGCCCGT GTCCCTGTGG TCGCAGATCC TGCGCGGGCT CACCCGGGAC
GCCGGCCTGC CCCCTGGGGA CCGTCTCGCG CACCTGGTCG CCGCGGACGC CTGGATCTGC
CCTGAGCGCT TCCGGCGGGA GCTGGTCAAC CAGCTCGCCG AGCTGCCGGC CCCGGCGGTG
CTGGTCCTCG ACGACGCGCA CCTCGTCCGG GATCCCGATG ATCTCGCCGG ACTGGAGCTG
CTCGCGAGCG AGGGCGAGGG CCACCTGCGC ATCGTCCTGT CGGGGCGGGC GCCGATTCTG
CGCGTGCACC GGCTGCGCGC CGAGGGCAGG GTCACCGAGA TCGGCCCGGC GGAGCTGGCC
TTCACCACGG CGGAGACCGT CGAACTGCTC GCCGCCCACG GCCTGCGCGT CCCGCCCGGC
GCGGCGGCCC AGCTGCGGCG CGCGACGGAG GGCTGGGCGG TCGGCCTGCG GCTGGCCGCG
GCGTGCGCGG TGTCGAGCGG AGCCCGGAGG CCGGCCCCCG GCGTGCCCGC CGGCCGGGAC
GAGCAGTGGG CGCCGGCCCC GCCGGTCCCC GGCCCGGCTG ATGTGGTCCC GGGCCGCGAC
GCCGAGTGTG CGGGCAGCGG CGTCCCGCCG GCCGAGCTCG ACCCGTCCCG CGCGGGGAGC
GGCGCTCTGC CGGCCGAGCT CGACCCGTCC CGCGCTGCGC GGGCGGCGAT CGCCGAGTTC
CTGCACGCGG AGGTGCTGGA GGAGTACCCG GAGCCCGTCC GACGGTTCCT GCTCCGGACG
AGCGTGCTGG AGCGGATCAG TGCCCCGCTC GCCCACGCGG TCTCCGCGGT GGCGCCCGCG
TCCGCCCAGA CATCCGCGCA CCTGCTCGGT GAGCTCGCGC GCCCGGGCGG CTTCCTCGTC
CGGCTGTTGG ACGGGCCGGC TGCGACAGCT CACCCGGGTG CCGGCGACCA CCCGGACGAC
GGGGTGGGCG GTCCGCTCCG GGCGGCCGTC GCCACGTTGC CGGACGGCCG CCCGGAGTAT
CGCCTCACCC AGGAGGCCAC GGCTGAGACC ACGCAGGAGT GGTACCGGTT CCATCGGATG
TTCGCGTCGA TGCTGCGCGG TGTGCTCGTG CGTGATCCGG AGGAGGACCC CCGCGAGCTC
AACCTCCGCG CCGCCCTCTG GTTCGCCGCG AACGACCGCA CACCCGACGC CGCCCGTCAC
GCGTCGCGGG CTGGTGACTG GTGGTATCTC GCCTGTCTGC TCGTCGACGG CCCGGCGCTG
GTGGACGTCC TGTTCGGACG CTCACCCGAG CTCGATGCGC TGGTCGCCGG GCTGCCTGCC
GCGGCGGCGG GGCTGTCGGC CGAGTGCGAT CTCGTCCTGG CCGTCGCACA GCTGCGCTCC
GGCCGGCTGG AGGCCGGTTC GGCCAGCCTG TCCTCCGCGC GGGCGCAGCT GCCCGCGGCG
GGGTCGGGCC CGGCGGCCGC CCGCCGCCGG ACGCTCGTCG ACCGGATCGA CATCGTGGAG
GCGTACCGTG CCGAGCTTGC CGGGGAACCG GCGGCGATGA TCGCCGCGGC CCGGCGGCTG
CAGCGTTCCG GGCCGCCGGG TGGCGCGCCC GCCGGGACGG CACCGCGTGC GGGCGCCGCC
GCCGGGCCGG CACGGGCATC CGGGGGCGAT CCGGACGCCG CGGCCGACCG GGCTGTGATC
GACCGGGCTG GGGCCGAGCG GGCTGGGGCC GAGCGGGCTG GGGCCGAGCG GGCTGGGGCC
GACCGGGCTC CGTCGAGGCC CGGTCGGGTG CCGGACGAGC GGGCCCGCGC GCTCGCGTTG
TGCGCGCGGG GCCGGGGCGA GCTGTGGCTC GGCCGACTGG CCGTCGCCGC CGGCCTGCTG
TGCGAGGGCG CCGAGGTGGC CCGGCGGGCC GGGCTCGGCG GCGTCGAGGT GTCCTGCCTG
GGGGCACTCG CCCTCCAGTA CGCGCTGCGC GGCCGGCTGC GCCAGGCCGA GAGCCACCTG
TACGCGGTGG TCGGCACGGC GGCCGACCCG TCCGGAGCAC TGGCCGGTCG CTCTGGTGCG
CTGGCCGGCC TGCCCGATGC GGCGACCAGC GTCCCCGGCG GGGCACGGCC CGGCGAGCAG
TGGGGCATCC CCGGACTGCC CGAGGCGTAT CTGGCCGCCG TGCTGGTTCA CCTGCAGCGT
GCGGAGCCGG TCGAGGCCGA CCGGTGGCTG GGCGCGGCGC GGATGACGAT CACTGCCGCC
CACCCCGCGT TCCTCGGCGG GATCGCCGCG ATCTGCGCCG CGCGGCTGCG CCTGCTCGGC
GGATCACCCG ACGAGGTGCG CGCGGCCCGG CGGATGCTGA CCGTCGCCAG GACCGGCCCG
ATGCCGCCGC TGTGCGCGGC GGCCAGGCGG GCGGCCGAGG CGGACCTGCT CGTCGCCGCG
GGTAATCCGG AGGCGGCCCG CCGGCTGCTG CTGCGGGACG CCGACCGCGC GGCCCCGGAC
CCGCAGACCC AGCTCGCGCT GGCGCGCTGC GCCCTGGCCT GCGCCGACGT TCCCGCGGCG
GAGGAGGCAC TCGCCTCGCT GCTGCGGGCC GACGACGGCG GCGCGGGACT CGTCGCGGCG
TGCGTGCTCG GCGCGGTCGC GGCCGCCCGG CGTGACGACC ACGCCCGCGC CGGTGGCTTG
CTCGCCCGGG CGGTGGCGCT CGCCGCGGAC GAGGGCATGG CCGCGCCGTT CTTCGAGGCG
GGGACGGAGG CGCTGGCGAT GGTGCTCGCC CATCCCGGGC TGACCGACGC CTATCCGGCC
TTCGTCGCCG TCCTCACCCG GTCGGGGAGG TCCGGGCCGC GGCCGGTGCC CGTACCGTCG
CGGTCCGCGG CGCAGGGGTC CGCGTCGCCT CGGCCTGCGG CGTCGAGGTC AGCGGCGGCG
CACGCGGGGC CCGGCGCGTC GGGGCAGGGG AGCGCGCCGC CTCGGGCGGG CGCCCGGGCG
CCCGCCTCGT CAGATGCTGG GTCGGCGGCC CGCACGGAGG AGCCAACGGA CCTGGTGGTC
GGGCCCGATG TCGTCGTGCC GCAACCGGCT CCGCCGATGT CGCAGCGGTC CCGGACCACG
GTGCCGGCCG CCGGGCCGGG GCGGCCGGCC GGGTCGTTCG CCGGCCCGGA TCCGGCCTGG
CCCGGCGCGC CGGGAGCCCC GGACGGCGGC GGTCGGGACG TCCGCAACGG CGTCGACCGC
GGCATCGGTA TCAACGACGG CGGCCTCAGC CGGGATGGCA ATGGCGTCGA TGGCGTCGGC
AACCGCATCG TCGGCAACCG CATCGACGGC AACCGCGTCG ACGGCAACCG CGTAGGTGGC
GACGGCTTCG GTGGTGGCGG CGGGGGCGTG GGTGGGCTCG GGTCGCCCCG GGGGCCGTGG
CGCCCCGATG GCGCGCCCGC GGGCGGCCCC GGTGACGCCC GGCGCCGAGG CGGCCCCGGT
GGTGGGAGCG CGGGTGGTGG GCCGCGCCCG GGGAGTGGGG AGCACCGGCC GGAGCCGGCC
GAACGGCTCA GCGAGCGCGA GCTCGCGGTG CTCAGCTACC TGCCCACGAT GCTCACCACC
GCGGAGATCG CGGCCGAGAT GTACGTGTCG GTGAACACCG TCAAGACGCA CCTCAAGAGC
ATCTACCGCA AGCTGGATGT CGCCAGGCGC CGGGACGCCG TCCACCGTGC GCGTGCCCTT
CACCTTTTGT GA
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| Protein sequence | MAGADEPDDR FGTPGSAVPR AGGGDGAAAR PRIQPSPAGD LPVVGTRLVP PRPVVPHVTR
PRLLALLDEA VDRPLTVVCA PAGAGKTMAL ADWARSGRPA HPVVWLRVDP MLGRRTARAE
HPGGDPAASG PPSPSPSQPG SQPRSPSSAL SLLPLARSTT RWPGPPVSLW SQILRGLTRD
AGLPPGDRLA HLVAADAWIC PERFRRELVN QLAELPAPAV LVLDDAHLVR DPDDLAGLEL
LASEGEGHLR IVLSGRAPIL RVHRLRAEGR VTEIGPAELA FTTAETVELL AAHGLRVPPG
AAAQLRRATE GWAVGLRLAA ACAVSSGARR PAPGVPAGRD EQWAPAPPVP GPADVVPGRD
AECAGSGVPP AELDPSRAGS GALPAELDPS RAARAAIAEF LHAEVLEEYP EPVRRFLLRT
SVLERISAPL AHAVSAVAPA SAQTSAHLLG ELARPGGFLV RLLDGPAATA HPGAGDHPDD
GVGGPLRAAV ATLPDGRPEY RLTQEATAET TQEWYRFHRM FASMLRGVLV RDPEEDPREL
NLRAALWFAA NDRTPDAARH ASRAGDWWYL ACLLVDGPAL VDVLFGRSPE LDALVAGLPA
AAAGLSAECD LVLAVAQLRS GRLEAGSASL SSARAQLPAA GSGPAAARRR TLVDRIDIVE
AYRAELAGEP AAMIAAARRL QRSGPPGGAP AGTAPRAGAA AGPARASGGD PDAAADRAVI
DRAGAERAGA ERAGAERAGA DRAPSRPGRV PDERARALAL CARGRGELWL GRLAVAAGLL
CEGAEVARRA GLGGVEVSCL GALALQYALR GRLRQAESHL YAVVGTAADP SGALAGRSGA
LAGLPDAATS VPGGARPGEQ WGIPGLPEAY LAAVLVHLQR AEPVEADRWL GAARMTITAA
HPAFLGGIAA ICAARLRLLG GSPDEVRAAR RMLTVARTGP MPPLCAAARR AAEADLLVAA
GNPEAARRLL LRDADRAAPD PQTQLALARC ALACADVPAA EEALASLLRA DDGGAGLVAA
CVLGAVAAAR RDDHARAGGL LARAVALAAD EGMAAPFFEA GTEALAMVLA HPGLTDAYPA
FVAVLTRSGR SGPRPVPVPS RSAAQGSASP RPAASRSAAA HAGPGASGQG SAPPRAGARA
PASSDAGSAA RTEEPTDLVV GPDVVVPQPA PPMSQRSRTT VPAAGPGRPA GSFAGPDPAW
PGAPGAPDGG GRDVRNGVDR GIGINDGGLS RDGNGVDGVG NRIVGNRIDG NRVDGNRVGG
DGFGGGGGGV GGLGSPRGPW RPDGAPAGGP GDARRRGGPG GGSAGGGPRP GSGEHRPEPA
ERLSERELAV LSYLPTMLTT AEIAAEMYVS VNTVKTHLKS IYRKLDVARR RDAVHRARAL
HLL
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