More than 300 homologs were found in PanDaTox collection
for query gene Lcho_1923 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_1923  two component LuxR family transcriptional regulator  100 
 
 		 248 aa  496  1e-140  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.177648 
 
 
-
 
NC_008825  Mpe_A1249  response regulator  58.61 
 
 		 245 aa  273  2.0000000000000002e-72  Methylibium petroleiphilum PM1  Bacteria  normal  0.0947405  normal  0.0892263 
 
 
-
 
NC_010524  Lcho_3952  two component LuxR family transcriptional regulator  36.55 
 
 		 222 aa  139  3e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.173353 
 
 
-
 
NC_008825  Mpe_A3237  response regulator  38.39 
 
 		 219 aa  135  5e-31  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1634  two component LuxR family transcriptional regulator  35.51 
 
 		 236 aa  122  6e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0598487 
 
 
-
 
NC_010002  Daci_0377  two component LuxR family transcriptional regulator  30.93 
 
 		 245 aa  99  7e-20  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3515  two component LuxR family transcriptional regulator  31.28 
 
 		 214 aa  93.2  4e-18  Jannaschia sp. CCS1  Bacteria  normal  0.150532  hitchhiker  0.00248481 
 
 
-
 
NC_012791  Vapar_0939  two component transcriptional regulator, LuxR family  29.17 
 
 		 247 aa  92.8  5e-18  Variovorax paradoxus S110  Bacteria  normal  0.224899  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  31.58 
 
 		 242 aa  91.3  1e-17  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  27.87 
 
 		 215 aa  90.9  2e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  31.85 
 
 		 236 aa  90.9  2e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_008781  Pnap_4084  two component LuxR family transcriptional regulator  31.89 
 
 		 246 aa  90.9  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  27.5 
 
 		 216 aa  90.1  3e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  30.45 
 
 		 241 aa  89.4  5e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  29.34 
 
 		 216 aa  89  6e-17  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_007947  Mfla_0447  two component LuxR family transcriptional regulator  32.11 
 
 		 244 aa  88.6  9e-17  Methylobacillus flagellatus KT  Bacteria  normal  0.013193  normal  0.6128 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  27.82 
 
 		 213 aa  88.2  1e-16  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  30.74 
 
 		 253 aa  87.4  2e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc3161  two component response regulator transcription regulator protein  32.96 
 
 		 231 aa  86.7  3e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_0612  two component LuxR family transcriptional regulator  32.2 
 
 		 231 aa  86.7  3e-16  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.105579 
 
 
-
 
NC_007974  Rmet_4986  two component LuxR family transcriptional regulator  32.78 
 
 		 237 aa  87  3e-16  Cupriavidus metallidurans CH34  Bacteria  normal  0.170484  normal  0.313407 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  31.15 
 
 		 237 aa  86.3  4e-16  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  30.71 
 
 		 215 aa  86.7  4e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  31.97 
 
 		 220 aa  85.5  7e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_012791  Vapar_3199  two component transcriptional regulator, LuxR family  28.28 
 
 		 262 aa  85.1  0.000000000000001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3373  two component LuxR family transcriptional regulator  28.69 
 
 		 262 aa  84.3  0.000000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.492418  n/a   
 
 
-
 
NC_012791  Vapar_3592  two component transcriptional regulator, LuxR family  30.25 
 
 		 235 aa  85.1  0.000000000000001  Variovorax paradoxus S110  Bacteria  normal  0.356082  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  30.29 
 
 		 215 aa  84.7  0.000000000000001  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  31.58 
 
 		 236 aa  84.3  0.000000000000002  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  30.08 
 
 		 303 aa  84  0.000000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  30.71 
 
 		 213 aa  84  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  30.71 
 
 		 215 aa  84  0.000000000000002  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  31.95 
 
 		 218 aa  84.3  0.000000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.81 
 
 		 224 aa  84  0.000000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  31.95 
 
 		 218 aa  84.3  0.000000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_008825  Mpe_A3621  response regulatory protein  34.69 
 
 		 243 aa  83.2  0.000000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  0.0192509  normal  0.145723 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  29.55 
 
 		 234 aa  83.6  0.000000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  31.12 
 
 		 215 aa  83.2  0.000000000000004  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  29.92 
 
 		 237 aa  82.8  0.000000000000004  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  28.81 
 
 		 223 aa  83.2  0.000000000000004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  27.57 
 
 		 209 aa  82.8  0.000000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  30.17 
 
 		 223 aa  82.8  0.000000000000005  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  30.71 
 
 		 215 aa  82.4  0.000000000000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  30.71 
 
 		 215 aa  82.4  0.000000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  30.71 
 
 		 215 aa  82.4  0.000000000000006  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  30.71 
 
 		 215 aa  82.4  0.000000000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  30.61 
 
 		 234 aa  82.4  0.000000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  30.71 
 
 		 215 aa  82.4  0.000000000000006  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  30.71 
 
 		 215 aa  82.4  0.000000000000006  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  30.67 
 
 		 231 aa  82  0.000000000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  27.69 
 
 		 222 aa  81.6  0.00000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.56 
 
 		 223 aa  81.3  0.00000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal  1 
 
 
-
 
NC_013132  Cpin_3102  two component transcriptional regulator, LuxR family  28.39 
 
 		 222 aa  81.3  0.00000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.774177  normal  0.15342 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  29.24 
 
 		 233 aa  80.5  0.00000000000002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  29.88 
 
 		 216 aa  80.5  0.00000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_3380  two component LuxR family transcriptional regulator  27.2 
 
 		 259 aa  80.9  0.00000000000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  28.86 
 
 		 227 aa  80.5  0.00000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3628  two component LuxR family transcriptional regulator  26.16 
 
 		 292 aa  80.5  0.00000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.350857 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  27.46 
 
 		 216 aa  80.5  0.00000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  25.71 
 
 		 228 aa  80.5  0.00000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  33.51 
 
 		 231 aa  80.1  0.00000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.162111 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  29.29 
 
 		 220 aa  80.1  0.00000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0724  two component transcriptional regulator, LuxR family  29.08 
 
 		 210 aa  80.1  0.00000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.836709 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  28.98 
 
 		 209 aa  80.1  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  29.96 
 
 		 230 aa  80.1  0.00000000000003  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  27.08 
 
 		 220 aa  79.7  0.00000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  28.23 
 
 		 219 aa  79.7  0.00000000000004  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  28.23 
 
 		 219 aa  79.7  0.00000000000004  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  28.23 
 
 		 219 aa  79.7  0.00000000000004  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal  1 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  30.33 
 
 		 221 aa  79.3  0.00000000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_2543  two component LuxR family transcriptional regulator  24.47 
 
 		 230 aa  79.3  0.00000000000005  Polaromonas sp. JS666  Bacteria  normal  0.149636  normal  0.0443917 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  30.99 
 
 		 213 aa  79.3  0.00000000000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  29.55 
 
 		 225 aa  79.3  0.00000000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.67 
 
 		 215 aa  79  0.00000000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  28.34 
 
 		 227 aa  79  0.00000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  28.46 
 
 		 225 aa  79  0.00000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  28.51 
 
 		 214 aa  78.6  0.00000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_008781  Pnap_3764  two component LuxR family transcriptional regulator  31.12 
 
 		 232 aa  79  0.00000000000008  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  27.85 
 
 		 215 aa  78.6  0.00000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  29.96 
 
 		 212 aa  77.8  0.0000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  27.8 
 
 		 220 aa  77.8  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  30.17 
 
 		 225 aa  77.8  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  23.55 
 
 		 262 aa  78.2  0.0000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  29.11 
 
 		 211 aa  78.2  0.0000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  29.83 
 
 		 214 aa  77.4  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  26.91 
 
 		 217 aa  77  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  30.58 
 
 		 215 aa  77.4  0.0000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  28.57 
 
 		 222 aa  77.4  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  28.99 
 
 		 218 aa  77.8  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  27.07 
 
 		 221 aa  77.8  0.0000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  27.97 
 
 		 229 aa  77.8  0.0000000000002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.63 
 
 		 216 aa  77  0.0000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  26.61 
 
 		 215 aa  77  0.0000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal  1 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  27.16 
 
 		 211 aa  77  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_011769  DvMF_1607  two component transcriptional regulator, LuxR family  31.28 
 
 		 236 aa  77  0.0000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  27.67 
 
 		 249 aa  76.6  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  29.57 
 
 		 219 aa  77  0.0000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  28.81 
 
 		 212 aa  77  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.81 
 
 		 239 aa  77  0.0000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  29.63 
 
 		 223 aa  76.6  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
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