| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1923 |
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| Symbol | |
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| ID | 6159763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2084994 |
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| End bp | 2085740 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664687 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001790955 |
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| Protein GI | 171058606 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.177648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC GCACGCTCAT CGTCGAAGAC AACGCCGTTG CACGCCAGTT CCTGGCGCGG
GTGGTGCGCG AGAGCTTCAG CGACGACATC GTCTTCAGCG AAGCCGGTGA TCTGGATGCC
GCGCGCCGCA TCCTCGCCAT CCAGGCCAGC GAACGGGCCC AGGTTCCCGA CGATGCCTTC
CGCCTGATCC TGTGCGACAT CGAACAGCCC GACGGCAGCG GCCTCGAACT GCTGGCGCAG
CTGAGCGACT ACCCGGCCAT CAAGATCGCC ACCACGCTGC ACTCGGACGA CGACCACCTG
TTCCCGGCGC TGCAATGCGG CGCCAACGGA TATCTGCTCA AGGAAGACCG CTTCGAGGTG
CTGGTCGAGG AGTTGCAGCG CATCGTGCGC GGTCAGCCGC CGCTGTCGCC GGCGATGGCG
CGGCGCCTGC TCGGCTTCTT TCGGGGCAGC GACATCAGCA CCACGCGCAG CGGTCTCGAC
AGCCGCTTCC CGCGTTCGGA AGGGTTTGCC GCTTCGGGCA TGGGGTCGTC GATGCTGTCC
GGCCTGCCCG GCGACATCAT CAGCGAGCGC GAATCCGAAG TCCTGATGCT GCTCAGCAAG
GGCTTCATGA TCAAGGAGAT CGCGCGCACG ATGGGCATCA AGTGGTTCGC CGTCAACGAC
CACATCCGCT CGGTCTACCG CAAGCTCGCG CTCAGCAGCT CGCCCGAAGC GGCGCTGCTG
CACAGCCGCG AGGTCTTCAG CCAGTAG
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| Protein sequence | MSLRTLIVED NAVARQFLAR VVRESFSDDI VFSEAGDLDA ARRILAIQAS ERAQVPDDAF
RLILCDIEQP DGSGLELLAQ LSDYPAIKIA TTLHSDDDHL FPALQCGANG YLLKEDRFEV
LVEELQRIVR GQPPLSPAMA RRLLGFFRGS DISTTRSGLD SRFPRSEGFA ASGMGSSMLS
GLPGDIISER ESEVLMLLSK GFMIKEIART MGIKWFAVND HIRSVYRKLA LSSSPEAALL
HSREVFSQ
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