More than 300 homologs were found in PanDaTox collection
for query gene Mpe_A1249 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008825  Mpe_A1249  response regulator  100 
 
 		 245 aa  494  1e-139  Methylibium petroleiphilum PM1  Bacteria  normal  0.0947405  normal  0.0892263 
 
 
-
 
NC_010524  Lcho_1923  two component LuxR family transcriptional regulator  58.61 
 
 		 248 aa  273  1.0000000000000001e-72  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.177648 
 
 
-
 
NC_010524  Lcho_3952  two component LuxR family transcriptional regulator  41.8 
 
 		 222 aa  164  9e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.173353 
 
 
-
 
NC_008825  Mpe_A3237  response regulator  40.5 
 
 		 219 aa  157  2e-37  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1634  two component LuxR family transcriptional regulator  38.02 
 
 		 236 aa  137  1e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0598487 
 
 
-
 
NC_007947  Mfla_0447  two component LuxR family transcriptional regulator  34.43 
 
 		 244 aa  124  1e-27  Methylobacillus flagellatus KT  Bacteria  normal  0.013193  normal  0.6128 
 
 
-
 
NC_003295  RSc3161  two component response regulator transcription regulator protein  37.57 
 
 		 231 aa  118  9.999999999999999e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  34.98 
 
 		 231 aa  117  1.9999999999999998e-25  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.162111 
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  35.25 
 
 		 229 aa  112  4.0000000000000004e-24  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_4084  two component LuxR family transcriptional regulator  36.6 
 
 		 246 aa  112  7.000000000000001e-24  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3515  two component LuxR family transcriptional regulator  35.25 
 
 		 214 aa  111  1.0000000000000001e-23  Jannaschia sp. CCS1  Bacteria  normal  0.150532  hitchhiker  0.00248481 
 
 
-
 
NC_012791  Vapar_3199  two component transcriptional regulator, LuxR family  33.88 
 
 		 262 aa  111  1.0000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_0377  two component LuxR family transcriptional regulator  32.1 
 
 		 245 aa  109  4.0000000000000004e-23  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_1772  two component transcriptional regulator, LuxR family  32.26 
 
 		 262 aa  107  1e-22  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  30.49 
 
 		 262 aa  108  1e-22  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_007908  Rfer_3373  two component LuxR family transcriptional regulator  29.37 
 
 		 262 aa  106  3e-22  Rhodoferax ferrireducens T118  Bacteria  normal  0.492418  n/a   
 
 
-
 
NC_010002  Daci_3380  two component LuxR family transcriptional regulator  30.33 
 
 		 259 aa  106  3e-22  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
-
 
NC_012791  Vapar_0939  two component transcriptional regulator, LuxR family  31.97 
 
 		 247 aa  106  4e-22  Variovorax paradoxus S110  Bacteria  normal  0.224899  n/a   
 
 
-
 
NC_008781  Pnap_3628  two component LuxR family transcriptional regulator  30.08 
 
 		 292 aa  106  4e-22  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.350857 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.33 
 
 		 216 aa  106  4e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  32.79 
 
 		 213 aa  105  9e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_007973  Rmet_0612  two component LuxR family transcriptional regulator  33.61 
 
 		 231 aa  103  2e-21  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.105579 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  33.74 
 
 		 220 aa  103  3e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  31.6 
 
 		 226 aa  102  5e-21  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_007948  Bpro_2543  two component LuxR family transcriptional regulator  30.77 
 
 		 230 aa  102  5e-21  Polaromonas sp. JS666  Bacteria  normal  0.149636  normal  0.0443917 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  32.13 
 
 		 220 aa  102  5e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  32.39 
 
 		 215 aa  101  8e-21  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  33.51 
 
 		 215 aa  101  1e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_012791  Vapar_3592  two component transcriptional regulator, LuxR family  32.92 
 
 		 235 aa  101  1e-20  Variovorax paradoxus S110  Bacteria  normal  0.356082  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  31.87 
 
 		 224 aa  100  2e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_007974  Rmet_4986  two component LuxR family transcriptional regulator  32.93 
 
 		 237 aa  100  2e-20  Cupriavidus metallidurans CH34  Bacteria  normal  0.170484  normal  0.313407 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.88 
 
 		 226 aa  100  2e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  35.37 
 
 		 227 aa  100  2e-20  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  30.99 
 
 		 214 aa  100  3e-20  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013132  Cpin_3102  two component transcriptional regulator, LuxR family  33.47 
 
 		 222 aa  100  3e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.774177  normal  0.15342 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  31.71 
 
 		 220 aa  100  3e-20  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  31.98 
 
 		 215 aa  99.8  3e-20  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  31.98 
 
 		 215 aa  99.4  5e-20  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  30.04 
 
 		 226 aa  99  6e-20  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  31.58 
 
 		 215 aa  98.6  7e-20  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  33.2 
 
 		 243 aa  99  7e-20  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  29.88 
 
 		 227 aa  98.6  8e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  29.46 
 
 		 212 aa  98.6  8e-20  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  32.52 
 
 		 218 aa  98.6  9e-20  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  32.52 
 
 		 218 aa  98.6  9e-20  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.13 
 
 		 215 aa  97.8  1e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  29.46 
 
 		 212 aa  97.8  1e-19  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  31.43 
 
 		 222 aa  97.4  2e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  30.58 
 
 		 217 aa  97.4  2e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  27.24 
 
 		 220 aa  97.4  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  31.93 
 
 		 215 aa  97.8  2e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal  1 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  30.83 
 
 		 216 aa  97.1  2e-19  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  31.02 
 
 		 223 aa  97.4  2e-19  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  31.58 
 
 		 215 aa  96.7  3e-19  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  31.58 
 
 		 215 aa  96.7  3e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  31.58 
 
 		 215 aa  96.7  3e-19  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  31.78 
 
 		 211 aa  96.7  3e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0724  two component transcriptional regulator, LuxR family  34.95 
 
 		 210 aa  96.7  3e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.836709 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  31.58 
 
 		 215 aa  96.7  3e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  30.8 
 
 		 236 aa  96.7  3e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  31.58 
 
 		 215 aa  96.7  3e-19  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  29.32 
 
 		 230 aa  96.3  4e-19  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  33.06 
 
 		 219 aa  96.3  4e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  30.89 
 
 		 242 aa  95.9  5e-19  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  34.57 
 
 		 225 aa  95.9  5e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  30.71 
 
 		 211 aa  95.9  5e-19  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.05 
 
 		 239 aa  95.9  6e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  33.06 
 
 		 219 aa  95.5  6e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  27.94 
 
 		 222 aa  95.5  6e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_008825  Mpe_A3621  response regulatory protein  32.27 
 
 		 243 aa  95.1  8e-19  Methylibium petroleiphilum PM1  Bacteria  normal  0.0192509  normal  0.145723 
 
 
-
 
NC_009767  Rcas_2258  two component LuxR family transcriptional regulator  32.14 
 
 		 254 aa  95.1  8e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00245701 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  31.05 
 
 		 217 aa  94.7  1e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  33.2 
 
 		 223 aa  94.4  1e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  30.17 
 
 		 244 aa  94.4  1e-18  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  31.87 
 
 		 254 aa  94.7  1e-18  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  31.45 
 
 		 225 aa  94.4  1e-18  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  31.98 
 
 		 207 aa  94.4  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  30.89 
 
 		 204 aa  94.7  1e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  30.17 
 
 		 216 aa  94.7  1e-18  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  30.49 
 
 		 209 aa  94  2e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  30.61 
 
 		 212 aa  94.4  2e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  31.12 
 
 		 224 aa  94.4  2e-18  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  29.8 
 
 		 229 aa  93.6  2e-18  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  28.93 
 
 		 207 aa  94  2e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  30.24 
 
 		 227 aa  93.6  2e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  30.13 
 
 		 209 aa  94.4  2e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  32.64 
 
 		 223 aa  94  2e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  30.49 
 
 		 217 aa  93.2  3e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  31.73 
 
 		 215 aa  93.2  3e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  29.27 
 
 		 220 aa  92.8  4e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  28.63 
 
 		 230 aa  93.2  4e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  34.4 
 
 		 236 aa  92.8  4e-18  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  32.65 
 
 		 229 aa  92.8  4e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  29.8 
 
 		 219 aa  93.2  4e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  30.89 
 
 		 232 aa  92.4  5e-18  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  32.93 
 
 		 223 aa  92.4  5e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  30.61 
 
 		 218 aa  92.4  6e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  30.89 
 
 		 237 aa  92.4  6e-18  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  31.98 
 
 		 206 aa  92  7e-18  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  30.4 
 
 		 215 aa  92  7e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
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