More than 300 homologs were found in PanDaTox collection
for query gene Krad_4147 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_4147  extracellular solute-binding protein family 1  100 
 
 
441 aa  890    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.892231  normal 
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  33.25 
 
 
414 aa  199  7.999999999999999e-50  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  31.97 
 
 
415 aa  196  8.000000000000001e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_013131  Caci_4993  extracellular solute-binding protein family 1  32.69 
 
 
432 aa  189  9e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0450999  normal  0.012477 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  30.05 
 
 
412 aa  177  3e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  29.7 
 
 
421 aa  176  9e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  29.97 
 
 
412 aa  174  2.9999999999999996e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2832  extracellular solute-binding protein family 1  31.28 
 
 
417 aa  170  4e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.617934  n/a   
 
 
-
 
NC_013595  Sros_3842  extracellular solute-binding protein family 1  31.06 
 
 
429 aa  163  6e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0316121  normal  0.0422385 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  26.65 
 
 
403 aa  89.4  1e-16  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  24.35 
 
 
410 aa  87.8  3e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  25.45 
 
 
504 aa  86.3  9e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  24.77 
 
 
410 aa  85.1  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  24.77 
 
 
410 aa  85.1  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  25.71 
 
 
415 aa  83.2  0.000000000000008  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  25.52 
 
 
424 aa  83.2  0.000000000000008  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  25.42 
 
 
433 aa  80.9  0.00000000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.7 
 
 
436 aa  80.5  0.00000000000005  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  27.86 
 
 
427 aa  80.5  0.00000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  25.55 
 
 
446 aa  80.5  0.00000000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  22.81 
 
 
402 aa  80.5  0.00000000000006  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  25.38 
 
 
430 aa  79.3  0.0000000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  25.38 
 
 
430 aa  79.3  0.0000000000001  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  27.71 
 
 
428 aa  79  0.0000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  26.65 
 
 
437 aa  78.6  0.0000000000002  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_013093  Amir_0403  extracellular solute-binding protein family 1  26.68 
 
 
426 aa  78.6  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.512139  n/a   
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  25.74 
 
 
399 aa  78.2  0.0000000000003  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  27.42 
 
 
430 aa  78.2  0.0000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.19 
 
 
437 aa  77.8  0.0000000000004  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  23.38 
 
 
445 aa  77  0.0000000000006  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  27.45 
 
 
426 aa  76.6  0.0000000000009  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  25.94 
 
 
407 aa  75.9  0.000000000001  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  27.71 
 
 
437 aa  74.7  0.000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  26.45 
 
 
442 aa  74.3  0.000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  26.23 
 
 
420 aa  74.3  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0063  extracellular solute-binding protein family 1  28.49 
 
 
475 aa  73.6  0.000000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  27.09 
 
 
437 aa  73.6  0.000000000007  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  28.12 
 
 
410 aa  73.6  0.000000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  28.12 
 
 
410 aa  73.6  0.000000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3337  extracellular solute-binding protein family 1  26.52 
 
 
427 aa  72.4  0.00000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.806542  normal 
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  24.65 
 
 
422 aa  72.8  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_009667  Oant_0354  extracellular solute-binding protein  24.91 
 
 
419 aa  72.8  0.00000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.188589  n/a   
 
 
-
 
NC_012669  Bcav_1708  extracellular solute-binding protein family 1  27.68 
 
 
458 aa  71.6  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  22.33 
 
 
416 aa  72  0.00000000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  25.18 
 
 
423 aa  71.6  0.00000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27350  ABC-type sugar transport system, periplasmic component  27.86 
 
 
444 aa  71.2  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.404715  normal  0.481515 
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  25.98 
 
 
420 aa  70.5  0.00000000005  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  25.98 
 
 
420 aa  70.5  0.00000000006  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.24 
 
 
458 aa  70.1  0.00000000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  23.5 
 
 
434 aa  70.1  0.00000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  25.25 
 
 
422 aa  70.1  0.00000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  27.57 
 
 
426 aa  69.7  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  27.61 
 
 
419 aa  69.3  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  24.41 
 
 
419 aa  69.3  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  23.76 
 
 
457 aa  68.6  0.0000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  24.92 
 
 
440 aa  68.2  0.0000000003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_013205  Aaci_1215  extracellular solute-binding protein family 1  23.46 
 
 
446 aa  68.2  0.0000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.0000064062  n/a   
 
 
-
 
NC_013172  Bfae_28390  ABC-type sugar transport system, periplasmic component  27.7 
 
 
453 aa  67.8  0.0000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5872  ABC-type sugar transport system periplasmic component-like protein  28.85 
 
 
460 aa  67.8  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.696543 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  26.11 
 
 
416 aa  67.4  0.0000000005  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  25.44 
 
 
444 aa  67.4  0.0000000005  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_007802  Jann_3553  extracellular solute-binding protein  31.21 
 
 
419 aa  67.4  0.0000000005  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  24.4 
 
 
458 aa  67  0.0000000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_010816  BLD_0922  MalE-type ABC sugar transport system periplasmic component  25.4 
 
 
447 aa  67  0.0000000006  Bifidobacterium longum DJO10A  Bacteria  normal  0.755265  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  24.4 
 
 
458 aa  67  0.0000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  24.08 
 
 
458 aa  67  0.0000000007  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.4 
 
 
458 aa  67  0.0000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  23.8 
 
 
458 aa  67  0.0000000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3808  extracellular solute-binding protein family 1  31.85 
 
 
427 aa  67  0.0000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.750227 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.26 
 
 
458 aa  66.6  0.0000000008  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7201  extracellular solute-binding protein family 1  37.14 
 
 
447 aa  66.6  0.0000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  30.56 
 
 
430 aa  66.6  0.0000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.18 
 
 
458 aa  66.6  0.0000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  25.62 
 
 
416 aa  65.9  0.000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  25.99 
 
 
443 aa  66.2  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_013526  Tter_2042  extracellular solute-binding protein family 1  25.55 
 
 
483 aa  66.2  0.000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.0000000305417  n/a   
 
 
-
 
NC_010003  Pmob_0828  extracellular solute-binding protein  21.98 
 
 
424 aa  66.2  0.000000001  Petrotoga mobilis SJ95  Bacteria  normal  0.142269  n/a   
 
 
-
 
NC_009636  Smed_2358  extracellular solute-binding protein  26.11 
 
 
441 aa  66.2  0.000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  23.81 
 
 
422 aa  65.5  0.000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_2920  extracellular solute-binding protein family 1  24.17 
 
 
424 aa  65.9  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  21.83 
 
 
443 aa  65.5  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  26.52 
 
 
436 aa  65.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.26 
 
 
458 aa  65.1  0.000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6524  extracellular solute-binding protein family 1  24.01 
 
 
424 aa  65.1  0.000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.514278  normal  0.451088 
 
 
-
 
NC_012858  Rleg_6765  extracellular solute-binding protein family 1  24.33 
 
 
419 aa  64.7  0.000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.979933  normal 
 
 
-
 
NC_014165  Tbis_0870  extracellular solute-binding protein family 1  25.57 
 
 
419 aa  64.7  0.000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.649209  normal  0.121264 
 
 
-
 
NC_013131  Caci_2622  extracellular solute-binding protein family 1  30.89 
 
 
437 aa  63.9  0.000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0574924  normal  0.833644 
 
 
-
 
NC_008541  Arth_0090  extracellular solute-binding protein  33.81 
 
 
441 aa  63.9  0.000000005  Arthrobacter sp. FB24  Bacteria  normal  0.214251  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  24.77 
 
 
420 aa  63.9  0.000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_008698  Tpen_1619  extracellular solute-binding protein  24.6 
 
 
450 aa  63.9  0.000000006  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_012669  Bcav_3000  extracellular solute-binding protein family 1  33.82 
 
 
450 aa  63.9  0.000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4693  extracellular solute-binding protein family 1  26.25 
 
 
457 aa  63.9  0.000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.363745 
 
 
-
 
NC_012880  Dd703_0698  extracellular solute-binding protein family 1  27.53 
 
 
428 aa  63.5  0.000000007  Dickeya dadantii Ech703  Bacteria  normal  0.0317884  n/a   
 
 
-
 
NC_013093  Amir_4241  extracellular solute-binding protein family 1  33.33 
 
 
422 aa  62.8  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0758  extracellular solute-binding protein family 1  23.94 
 
 
443 aa  62.8  0.00000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05710  ABC-type sugar transport system, periplasmic component  27.13 
 
 
425 aa  62.8  0.00000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.13799  n/a   
 
 
-
 
NC_013501  Rmar_0358  extracellular solute-binding protein family 1  24.78 
 
 
441 aa  62.4  0.00000001  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6112  extracellular solute-binding protein family 1  22.55 
 
 
424 aa  62.8  0.00000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521338  normal 
 
 
-
 
NC_009972  Haur_3641  extracellular solute-binding protein  23.84 
 
 
444 aa  62.8  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0494  extracellular solute-binding protein  29.45 
 
 
465 aa  63.2  0.00000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
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