More than 300 homologs were found in PanDaTox collection
for query gene Cphy_0494 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0494  extracellular solute-binding protein  100 
 
 
465 aa  959    Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  21.72 
 
 
422 aa  90.5  5e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  26.84 
 
 
420 aa  79  0.0000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  29.36 
 
 
410 aa  77.4  0.0000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  29.02 
 
 
410 aa  74.7  0.000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  28.82 
 
 
410 aa  73.2  0.000000000009  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  30.4 
 
 
424 aa  71.2  0.00000000004  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  25.33 
 
 
403 aa  70.1  0.00000000009  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_011886  Achl_3566  extracellular solute-binding protein family 1  28.08 
 
 
426 aa  69.3  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  26.14 
 
 
414 aa  69.3  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  24.65 
 
 
411 aa  68.9  0.0000000002  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  26.37 
 
 
445 aa  68.9  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_013595  Sros_3842  extracellular solute-binding protein family 1  29.3 
 
 
429 aa  68.6  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0316121  normal  0.0422385 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  26.14 
 
 
366 aa  68.2  0.0000000003  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_013411  GYMC61_2716  extracellular solute-binding protein family 1  27.55 
 
 
441 aa  68.6  0.0000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  24.75 
 
 
419 aa  67.4  0.0000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  22.39 
 
 
417 aa  67.4  0.0000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0598  extracellular solute-binding protein family 1  29.22 
 
 
446 aa  67.4  0.0000000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.764573  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  32.06 
 
 
415 aa  67  0.0000000007  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  27.46 
 
 
455 aa  66.2  0.000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  24.42 
 
 
411 aa  65.9  0.000000001  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  26.54 
 
 
406 aa  65.5  0.000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  27.08 
 
 
435 aa  65.5  0.000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  25.76 
 
 
411 aa  65.9  0.000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  26.67 
 
 
435 aa  64.3  0.000000004  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  27.35 
 
 
427 aa  63.9  0.000000005  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  29.67 
 
 
445 aa  63.5  0.000000007  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  24.49 
 
 
415 aa  62.8  0.00000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  24.8 
 
 
415 aa  62.4  0.00000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4993  extracellular solute-binding protein family 1  28.11 
 
 
432 aa  62.8  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0450999  normal  0.012477 
 
 
-
 
NC_009664  Krad_4147  extracellular solute-binding protein family 1  29.86 
 
 
441 aa  62.8  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.892231  normal 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  26.24 
 
 
416 aa  62.4  0.00000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1105  extracellular solute-binding protein family 1  30.56 
 
 
442 aa  62  0.00000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.314126  normal  0.258829 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  26.24 
 
 
416 aa  61.6  0.00000003  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  25.09 
 
 
414 aa  61.6  0.00000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_014151  Cfla_3054  extracellular solute-binding protein family 1  28.03 
 
 
429 aa  61.6  0.00000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0183103 
 
 
-
 
NC_008698  Tpen_1152  extracellular solute-binding protein  25.36 
 
 
393 aa  61.6  0.00000003  Thermofilum pendens Hrk 5  Archaea  normal  0.0401617  n/a   
 
 
-
 
NC_010483  TRQ2_1614  extracellular solute-binding protein  25.24 
 
 
391 aa  61.6  0.00000003  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000159886  n/a   
 
 
-
 
NC_007333  Tfu_1619  putative sugar-binding lipoprotein  30.38 
 
 
434 aa  61.2  0.00000004  Thermobifida fusca YX  Bacteria  normal  0.195944  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  27.67 
 
 
414 aa  61.2  0.00000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  32.5 
 
 
422 aa  61.2  0.00000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  29.17 
 
 
408 aa  60.8  0.00000005  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  21.29 
 
 
423 aa  60.8  0.00000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_013131  Caci_7721  extracellular solute-binding protein family 1  30 
 
 
462 aa  60.8  0.00000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0923  MalE-type ABC sugar transport system periplasmic component  27.69 
 
 
450 aa  60.8  0.00000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.293658  n/a   
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  26.36 
 
 
433 aa  60.5  0.00000006  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_011981  Avi_7590  ABC transporter substrate binding protein (sugar)  25.34 
 
 
447 aa  60.5  0.00000006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0310  extracellular solute-binding protein family 1  26.56 
 
 
440 aa  60.1  0.00000007  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0877495  normal  0.113221 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  24.52 
 
 
410 aa  60.1  0.00000009  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1113  sugar ABC transporter, sugar-binding protein  23.23 
 
 
419 aa  59.7  0.0000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0203061  n/a   
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  33.68 
 
 
427 aa  59.3  0.0000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  24.88 
 
 
423 aa  59.7  0.0000001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  21.83 
 
 
442 aa  59.3  0.0000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1269  extracellular solute-binding protein family 1  29.73 
 
 
412 aa  59.3  0.0000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  24.21 
 
 
420 aa  59.3  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5698  extracellular solute-binding protein family 1  22.53 
 
 
412 aa  59.7  0.0000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.145305  normal  0.141272 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  28.57 
 
 
410 aa  58.9  0.0000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  30.14 
 
 
416 aa  58.5  0.0000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1552  extracellular solute-binding protein  25 
 
 
391 aa  58.9  0.0000002  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.000000398035  n/a   
 
 
-
 
NC_011898  Ccel_1133  extracellular solute-binding protein family 1  33.06 
 
 
451 aa  58.5  0.0000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3573  extracellular solute-binding protein family 1  31.03 
 
 
441 aa  58.5  0.0000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.862573  normal  0.0197328 
 
 
-
 
NC_008786  Veis_0944  extracellular solute-binding protein  26.06 
 
 
422 aa  58.2  0.0000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.544942  normal 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  24.62 
 
 
504 aa  57.8  0.0000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  22.94 
 
 
410 aa  57.8  0.0000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  28.69 
 
 
440 aa  57.4  0.0000005  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3941  extracellular solute-binding protein family 1  23.71 
 
 
490 aa  57  0.0000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.486977 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.31 
 
 
458 aa  57  0.0000007  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  23.66 
 
 
443 aa  57  0.0000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_013093  Amir_1846  extracellular solute-binding protein family 1  23.9 
 
 
425 aa  57  0.0000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.169612  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  26.03 
 
 
461 aa  56.6  0.0000009  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_014165  Tbis_0069  extracellular solute-binding protein family 1  31.79 
 
 
448 aa  56.6  0.0000009  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1454  extracellular solute-binding protein family 1  30.63 
 
 
445 aa  56.6  0.0000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  28.31 
 
 
458 aa  56.6  0.0000009  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.19 
 
 
458 aa  55.8  0.000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_014210  Ndas_2365  extracellular solute-binding protein family 1  27.01 
 
 
416 aa  56.2  0.000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.618021 
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.19 
 
 
458 aa  55.8  0.000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  24.54 
 
 
414 aa  55.8  0.000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  26.88 
 
 
420 aa  56.2  0.000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  26.09 
 
 
447 aa  56.2  0.000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  26.88 
 
 
420 aa  56.2  0.000001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  27.4 
 
 
458 aa  55.5  0.000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.19 
 
 
458 aa  55.8  0.000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.19 
 
 
458 aa  55.8  0.000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.85 
 
 
458 aa  55.8  0.000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.19 
 
 
458 aa  55.8  0.000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6192  ABC-type sugar transport system periplasmic component-like protein  29.05 
 
 
431 aa  55.5  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0222852  normal 
 
 
-
 
NC_013159  Svir_23430  ABC-type sugar transport system, periplasmic component  24.4 
 
 
435 aa  55.1  0.000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.969599  normal 
 
 
-
 
NC_013204  Elen_2576  extracellular solute-binding protein family 1  25.57 
 
 
614 aa  55.8  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1543  extracellular solute-binding protein family 1  25.7 
 
 
478 aa  55.1  0.000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.793818  normal  0.0319696 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  27.41 
 
 
466 aa  54.7  0.000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2659  extracellular solute-binding protein family 1  26.72 
 
 
495 aa  55.1  0.000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0361435  n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  26.29 
 
 
432 aa  54.7  0.000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1511  extracellular solute-binding protein family 1  25 
 
 
424 aa  55.1  0.000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  25.51 
 
 
456 aa  55.1  0.000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  29.34 
 
 
423 aa  55.1  0.000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0592  extracellular solute-binding protein  23.04 
 
 
456 aa  55.1  0.000003  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000165278  n/a   
 
 
-
 
NC_013946  Mrub_0279  extracellular solute-binding protein family 1  23.16 
 
 
510 aa  54.3  0.000004  Meiothermus ruber DSM 1279  Bacteria  normal  0.795384  normal 
 
 
-
 
NC_010320  Teth514_1181  extracellular solute-binding protein  25.52 
 
 
413 aa  54.3  0.000004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000595288  n/a   
 
 
-
 
NC_013515  Smon_0145  extracellular solute-binding protein family 1  22.63 
 
 
442 aa  54.7  0.000004  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  24 
 
 
434 aa  54.3  0.000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
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