Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0358 |
Symbol | |
ID | 8566991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 398236 |
End bp | 399561 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003289650 |
Protein GI | 268315931 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGCC TCTTCCGACA TCGCTGCTGG ATCGGGCTGC TGGCCGGGGT GCTTCTGCTG GCCGGCTGTC ATCGTCCGGC ACCGACGCCC GTGCCGGAAA ACGGCAGGGT ACGGCTCGTC TACTGGACGG CCCCCAATCC TGACGAGCTG GCACTGGCCC GTGAGCTGGT GGCCGAGTGG ACGGCGGCCA ACCCGGACGT CGAGGTGATC GTGCAACCCA TCCCGGCCGG ACAGTCCAGC GAGGAGGTGC TGCTGGCCGC CGTGGCCGCG GGCACGACGC CCGACCTGTG CTCGAACATC TGGCCGGGCA TCGTCGAGGA TTTCGTCGAG GCCGGGGCGC TCGTGCCGCT GGATCGCTTC CCGGACTTCG ACTCGCTGCT CGAAGCCCGC ATCCCCGAGA CGGTGCGCGA GCCGTTCCGC TCACGCGACG GGCACTTCTA CCAGCTCCCC TGGAAGACGA ACCCCGTCAT GATGTTCTAC AACGTGCAAC TGTTGCGGGA AGCGGGGTTC GAGCGGCCGC CGCGCACCTA CGGCGAGTAC CTGGAAGCCG CCCGCCGCGT CACGGCCGAC ACCGACGGCG ACGGACTCAT CGACCGCTGG ATGGGCTATC GCGACATCCG TCCGATCTGG TGGCAACGGT ACTTCGACTA CTATGCCTTT TACATTGCCG CTTCGGGCGG GCGTACGCTC TTCGACCGAG AGGGTCGGCT GGCCGTCGAC ACGGCCGCTT CGAACCGGGT GTTCGATTTC TTCGCCCGCC TGTATGCCAT GGGCGCCTTC CCGAAGGCCG TCTGGACCAG CGCCGGAAGC CGCTTTCTGA AGGGCCAGCT CGCCACCGAT TTCACCGGCC CCTGGCACCT GATCTGGCTG GAAAAACATG CACCACCGAC GCTGACCTAC GACGTGGCGC CGATTCCCGT GCCGGACGAC CACGAAGGGC CGGTTTATAC CTACGGCGAC TACAAGAACA TCGTGATCTT TTCGACGACG CGCCATCCGG ACGTGGCCTG GCGGCTGGCC CGCTTTCTGG TGTCGCGCGA GGCCGACCGA CGGCTGCTGG AACGCACGCG CCAGATTCCC GTGCGTCGGG GCCTGCTCGA CGATCCGTAC TTCGCGCCCG TGTTCGAGCG CTATCCGATC CTCCGACGCT TTGCCGAACA GGCCGCCTAC ACGCGGAGCG TCGATAGTGC CCCTGATCTG AAAGAAATCC TGGACGCGTT CGCGCAGGAG TTCGAGGCGG CCGCCGTCTT CGGCGTGCGC TCGCCCGCCG AGGCGACCCG CCGCGCGTTG CGTCGCATTC AGATGATCCT GGACTGGAAT GCCTGA
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Protein sequence | MRRLFRHRCW IGLLAGVLLL AGCHRPAPTP VPENGRVRLV YWTAPNPDEL ALARELVAEW TAANPDVEVI VQPIPAGQSS EEVLLAAVAA GTTPDLCSNI WPGIVEDFVE AGALVPLDRF PDFDSLLEAR IPETVREPFR SRDGHFYQLP WKTNPVMMFY NVQLLREAGF ERPPRTYGEY LEAARRVTAD TDGDGLIDRW MGYRDIRPIW WQRYFDYYAF YIAASGGRTL FDREGRLAVD TAASNRVFDF FARLYAMGAF PKAVWTSAGS RFLKGQLATD FTGPWHLIWL EKHAPPTLTY DVAPIPVPDD HEGPVYTYGD YKNIVIFSTT RHPDVAWRLA RFLVSREADR RLLERTRQIP VRRGLLDDPY FAPVFERYPI LRRFAEQAAY TRSVDSAPDL KEILDAFAQE FEAAAVFGVR SPAEATRRAL RRIQMILDWN A
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