Gene Tbis_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0870 
Symbol 
ID9167356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp988555 
End bp989814 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003651487 
Protein GI296268855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.649209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.121264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCA GAGCCCTCGC ACTCCTGGTC ACCCTGCTGG TGGCCGGATG CGCCAGGCTC 
GCGGACGCGC CGGCGGAGCC GGCTCAGGGC ACCGGTGTCG GCCCGATCAC CCTCGCCATC
GGACGGGATA CCACCTCGTA CCTGAAGCCG CTCCTCGACC GGTGGAACCG GGCCCGCCCC
GCGGAGCGGG TCACGCTGCT GGAGCTCCCC GAGGCCGCGG ACGAGCAGCG CGCCCAGATG
GTCGCCAACC TCCAGGCGCG CAGCGACGTC TACGACGTGC TCGGGCTCGA CGTGGTGTGG
ACGGCGGAGT TCGCCGAGGC GGGGTGGATC GTCCCGCTCG ACCGGAGCCT CTTCCCCCTC
GACAAGATGC TCAGCGGTGT CGTGGACACC GCGATCTACC GGGGCAAGCT CTGGGCGGTG
CCGTACCTCA GCAACGCGGG GCTGCTCTAC TACCGGTCCG ACCTGCTGGA GAAGGAGGGC
CTGAAGCCGC CCCGGACCTG GGAGGAGCTG CGCGAGCAGG CCAAGCTCCT CAGCGCCGAG
TACGGCATCG GCGGGTACGC CGGGCAGTTC CTCCCGTACG AAGGGCTCAC CGTCAACTTC
ACCGAGGCCG TGGCGTCGGC GGGCGGATCG ATCCTCAGCC CGGACGCGCG CCGGGTCACG
ATGGACTTCG ACTCCGCGAG CGCCGCGCTC GGCTTCCTGG TCGACGGGGT GAAGGAGGGC
TGGATCCCCC GGGAGGCGCT CACCTACAAG GAGGAGGAGT CCCGGCTCGC CTTCCAGGAG
GGGCGGCTCG CCTTCGCCCG CAACTGGCCC CACGCGTACG GCCCGGCCAC CCGGTCAGAG
CTCGCCGGAC GGTTCGGCGT CACCCGCCTG CCCGGCCCCG ACGGACCGGG GTCGAGCACG
CTCGGCGGGA CGAACCTGGC GATCAGCGCG TACTCCAAGC ACCAGAAGTC CGCGCTCGAC
TTCATCCGCT TCTTCACCGG CTACGAGATC CAGCGGCTCG TGCTCACCGA GGGGTCCTTC
CCGCCGGTCC TCGCCGAGCT CTACGAGGAT CCGGAGCTGA TCAAGCGCTT CCCGTACCTG
CCCGTGCTCA AGGAGGCCAT CCTCACCGCC CGGCCTCGGC CGGTGACGGC GAACTACAAC
CAGGTCAGCC TGGTGATCTC CAGCGCCGTA TCCGACGCCC TCAACCTCAC CAAATCCGTC
GACGAAACCA TCGCCGATCT CAAACGTGAG CTCGGCGAGG TCATTCAGCT CGGAGGCTAA
 
Protein sequence
MIRRALALLV TLLVAGCARL ADAPAEPAQG TGVGPITLAI GRDTTSYLKP LLDRWNRARP 
AERVTLLELP EAADEQRAQM VANLQARSDV YDVLGLDVVW TAEFAEAGWI VPLDRSLFPL
DKMLSGVVDT AIYRGKLWAV PYLSNAGLLY YRSDLLEKEG LKPPRTWEEL REQAKLLSAE
YGIGGYAGQF LPYEGLTVNF TEAVASAGGS ILSPDARRVT MDFDSASAAL GFLVDGVKEG
WIPREALTYK EEESRLAFQE GRLAFARNWP HAYGPATRSE LAGRFGVTRL PGPDGPGSST
LGGTNLAISA YSKHQKSALD FIRFFTGYEI QRLVLTEGSF PPVLAELYED PELIKRFPYL
PVLKEAILTA RPRPVTANYN QVSLVISSAV SDALNLTKSV DETIADLKRE LGEVIQLGG