More than 300 homologs were found in PanDaTox collection
for query gene Cphy_0614 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0614  methyl-accepting chemotaxis sensory transducer  100 
 
 
429 aa  867    Clostridium phytofermentans ISDg  Bacteria  normal  0.0371385  n/a   
 
 
-
 
NC_010001  Cphy_1636  methyl-accepting chemotaxis sensory transducer  28.61 
 
 
456 aa  162  1e-38  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000322642  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  28.07 
 
 
664 aa  142  1.9999999999999998e-32  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
658 aa  132  9e-30  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5250  hypothetical protein  30.19 
 
 
466 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.869882  normal  0.134387 
 
 
-
 
NC_008789  Hhal_2165  methyl-accepting chemotaxis sensory transducer  27.45 
 
 
470 aa  131  2.0000000000000002e-29  Halorhodospira halophila SL1  Bacteria  normal  0.623772  n/a   
 
 
-
 
NC_007778  RPB_3522  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
471 aa  131  3e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.392623  normal  0.542302 
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  27.3 
 
 
645 aa  129  7.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4430  methyl-accepting chemotaxis sensory transducer  27.61 
 
 
641 aa  127  4.0000000000000003e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
674 aa  127  5e-28  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  27.49 
 
 
700 aa  122  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
700 aa  119  7.999999999999999e-26  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_008346  Swol_0971  putative methyl-accepting chemotaxis sensory transducer  28.54 
 
 
777 aa  116  7.999999999999999e-25  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271758  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  32.77 
 
 
542 aa  112  1.0000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  33.19 
 
 
562 aa  111  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
568 aa  110  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  28.71 
 
 
714 aa  110  4.0000000000000004e-23  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  33.64 
 
 
565 aa  110  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
691 aa  108  2e-22  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  30.74 
 
 
561 aa  108  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  31.89 
 
 
543 aa  107  3e-22  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  28.39 
 
 
714 aa  108  3e-22  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  32.59 
 
 
675 aa  108  3e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  28.39 
 
 
714 aa  107  3e-22  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  31.8 
 
 
563 aa  108  3e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
673 aa  107  6e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  32.71 
 
 
568 aa  107  6e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  30.61 
 
 
671 aa  107  6e-22  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  31.78 
 
 
681 aa  106  7e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.33 
 
 
523 aa  106  7e-22  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  31.34 
 
 
565 aa  106  7e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
741 aa  106  8e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  29.44 
 
 
481 aa  106  9e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  27.53 
 
 
540 aa  105  1e-21  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1697  methyl-accepting chemotaxis protein  32.38 
 
 
541 aa  105  1e-21  Methylibium petroleiphilum PM1  Bacteria  normal  0.796497  normal  0.294844 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  32.72 
 
 
566 aa  105  1e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  31.34 
 
 
602 aa  105  1e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  27.3 
 
 
532 aa  105  1e-21  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  32.7 
 
 
630 aa  105  2e-21  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_010814  Glov_1021  methyl-accepting chemotaxis sensory transducer  30.22 
 
 
518 aa  105  2e-21  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
688 aa  105  2e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  32.24 
 
 
563 aa  105  2e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  31.49 
 
 
691 aa  105  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  31.27 
 
 
549 aa  104  3e-21  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
714 aa  104  3e-21  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
674 aa  104  3e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  32.26 
 
 
564 aa  104  3e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_010003  Pmob_0696  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.64 
 
 
659 aa  104  3e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.738999  n/a   
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  30.93 
 
 
428 aa  104  4e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  31.18 
 
 
565 aa  104  4e-21  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_008609  Ppro_2677  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
818 aa  103  4e-21  Pelobacter propionicus DSM 2379  Bacteria  normal  0.730239  n/a   
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
545 aa  103  4e-21  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_011883  Ddes_1580  methyl-accepting chemotaxis sensory transducer  31.3 
 
 
686 aa  103  4e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
670 aa  103  4e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  30.8 
 
 
674 aa  104  4e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
630 aa  103  4e-21  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
630 aa  103  4e-21  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
672 aa  103  5e-21  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  32.68 
 
 
556 aa  103  5e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_010814  Glov_2507  methyl-accepting chemotaxis sensory transducer  32.68 
 
 
818 aa  103  6e-21  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00215675  n/a   
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  32.72 
 
 
563 aa  103  6e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  32.17 
 
 
578 aa  103  7e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  31.36 
 
 
676 aa  103  7e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0989  methyl-accepting chemotaxis protein  28.85 
 
 
689 aa  103  7e-21  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  29.86 
 
 
524 aa  103  7e-21  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
693 aa  103  8e-21  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  29.29 
 
 
557 aa  103  9e-21  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  29.72 
 
 
481 aa  102  9e-21  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  32.23 
 
 
630 aa  102  1e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
547 aa  102  1e-20  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  31.49 
 
 
691 aa  102  1e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011883  Ddes_0183  methyl-accepting chemotaxis sensory transducer  29.69 
 
 
696 aa  102  1e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.56 
 
 
1170 aa  102  1e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
563 aa  102  1e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  30.74 
 
 
640 aa  102  1e-20  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  30.88 
 
 
688 aa  102  1e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
730 aa  101  2e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  30.08 
 
 
696 aa  101  2e-20  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  32.08 
 
 
562 aa  102  2e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_013501  Rmar_0343  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
1079 aa  101  2e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  31.8 
 
 
587 aa  102  2e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
566 aa  101  2e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  30.41 
 
 
688 aa  101  2e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  26.22 
 
 
575 aa  102  2e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  32.11 
 
 
566 aa  102  2e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  28.76 
 
 
693 aa  101  2e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  29.84 
 
 
696 aa  101  3e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  30.41 
 
 
689 aa  100  3e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_009616  Tmel_0749  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
657 aa  101  3e-20  Thermosipho melanesiensis BI429  Bacteria  normal  0.388814  n/a   
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  32.59 
 
 
561 aa  101  3e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  30.67 
 
 
698 aa  101  3e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
563 aa  101  3e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  29.71 
 
 
601 aa  101  3e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  29.54 
 
 
656 aa  101  3e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  29.29 
 
 
542 aa  100  4e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
655 aa  100  4e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
563 aa  100  5e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  29.35 
 
 
533 aa  100  6e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
567 aa  99.8  7e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009654  Mmwyl1_0921  methyl-accepting chemotaxis sensory transducer  31.12 
 
 
677 aa  99.8  8e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.787316  normal 
 
 
-
 
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