| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1697 |
|---|
| Symbol | mcp |
|---|
| ID | 4785487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1820198 |
|---|
| End bp | 1821823 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640090268 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_001020892 |
|---|
| Protein GI | 124266888 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.796497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.294844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAC GGCGCCGCCG CGTCGCCAAC GAATCAGAAC CTGCCGCGCC CAAGGAGGGC
GCCACCATGA ACTGGATCCA GCGCCTGACC ATCGCCCGCC GCATCGGCGT CGGCTTCGGC
ACCCTGCTCG TCCTGGCCGC CGTGATGGCC GGCCTGGCGC TGCTGGCCCT GCAACGCACC
GGCGACGCCG TCGACCGCAT CGTGCAGGGT GAATGGGTCA AGGCCGGCGC CGCCGCCAGC
ATCGACACGC TCACCCGCGC CAACGCCCGG CGCACGATGG AGCTGTTCTT CGTCGAGGGC
TCCGCCGCCG CGGCCGTGCG CGAGCGCATC GCCGCCAACC GCCAGGGCAT CGACGAGGCC
ATGGCCACGC TCGAGCGTCT GGTCACGCTG CCCGACGGGC GCGAGAAGCT GGCCGCGATG
AAGACAGCGC GCGTGGCCTA CGTGACCGCG TTCTCCGAGG TCGACCGCCT GCTCAAGGCC
GGCCAGCGTG AGGCCGCCCA GGCGCAGCTG CTGGGCAGCA CCCTGCCGGC GCTCGACGCG
CTGCAGCAGC GCGTGCTGGA CATGTCGCAG TTCCAGGCCC GGCTGGCCCG CGAGACGGGG
GCCGAGGTCG CGGCCCGCAT CCACCAGGCG CTGATCGGCC TGGGCGTGCT CGGCCTGGGC
ATGCTGGCGG CCGCGGCGGG GCTGGGCACC TGGCTGGCCC GCGCCATCGC GCGGCCCATC
GAACAGGCCG TGGCCGTGGC CGAACGCGTG GCCTCGGGCG AGCTGGGCCA TCGCCTGGAG
TCCCGCCAGG GCGGCGAGCC CGGCCGCCTG ATGCACGCCC TGGCGCAGAT GGACCAGATC
CTCACGCGGC TGGTGGGCCG CGTGCGCGAG GCCAGCGAGA GCATCGCCAC GGGCTCGTCG
CAGATCGCCA CCGGCACCAC CGACCTCTCG CAGCGCACCG AGGAGCAGGC CTCCAACCTG
CAGCAGACCG CGGCCTCGAT GGAGCAGCTG GCCGGCACCG TGCGCCACAG CGCCGACGCC
GCGCGCAGCG CGTCCAGCCT CGCCCAGCAG GCGCGCGACG AGGCCGCGCA GGGTGGCGAG
CTGATGCAGA CCGTGGGCCA GACCATGCAG CGCATCAGCG AGGCCAGCCG CCGCATCGGC
GAGATCAACG CCGTCATCGA CGGCATCGCC TTCCAGACCA ACATCCTGGC GCTCAACGCC
GCGGTGGAAG CGGCGCGCGC CGGCGAGCAC GGCCGCGGCT TCGCGGTGGT GGCGTCGGAG
GTGCGGGCGC TGGCACAACG CAGCGCCGAG GCGGCGCGCT CGATCAAGGA GCTGGTGGCC
GGCAGCGTGG AAAGCGTGAG CCACGGCCAG GCCAGCGTGG CGCAGGCCAC GCAGCAGATC
GACGCCATCG TGGCCCGCGT GCGCAGCGTG AGCGACACCG TGGCGCAGAT CAGCGGCGCG
GCCGACGAGC AGTCGCGCGG CATCGAGCAG GTCAACCAGG CGGTGACGCA GCTCGACCAG
GTGACGCAAC AGAACGCGGC GCTGGTAGAG GAGAGCGCCG CGGCCTCCGA CAGCCTGAAG
CACCAGGCCG AGCAGATGGT GGCGGCGGTG GGCGTGTTCC GGGTGGGTGC TGCGGTCGCG
GCCTGA
|
|---|
| Protein sequence | MPTRRRRVAN ESEPAAPKEG ATMNWIQRLT IARRIGVGFG TLLVLAAVMA GLALLALQRT
GDAVDRIVQG EWVKAGAAAS IDTLTRANAR RTMELFFVEG SAAAAVRERI AANRQGIDEA
MATLERLVTL PDGREKLAAM KTARVAYVTA FSEVDRLLKA GQREAAQAQL LGSTLPALDA
LQQRVLDMSQ FQARLARETG AEVAARIHQA LIGLGVLGLG MLAAAAGLGT WLARAIARPI
EQAVAVAERV ASGELGHRLE SRQGGEPGRL MHALAQMDQI LTRLVGRVRE ASESIATGSS
QIATGTTDLS QRTEEQASNL QQTAASMEQL AGTVRHSADA ARSASSLAQQ ARDEAAQGGE
LMQTVGQTMQ RISEASRRIG EINAVIDGIA FQTNILALNA AVEAARAGEH GRGFAVVASE
VRALAQRSAE AARSIKELVA GSVESVSHGQ ASVAQATQQI DAIVARVRSV SDTVAQISGA
ADEQSRGIEQ VNQAVTQLDQ VTQQNAALVE ESAAASDSLK HQAEQMVAAV GVFRVGAAVA
A
|
|---|
| |