Gene BBta_5250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5250 
Symbol 
ID5154629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5472815 
End bp5474215 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content65% 
IMG OID640560020 
Producthypothetical protein 
Protein accessionYP_001241144 
Protein GI148256559 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.869882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.134387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGTT TCCGCAGCCG CAAGAACGAC CAAACGGATG CTCCTGCCCT GTTGGACGCC 
GCGCTCGAGG CCTTCCAGGA CACTTTGGCG CAGTGCCTCG ACGACTGGGC CGCGGGCAAG
CTCGACCGCG ACGTCGCCGA TCTCAACGCG GCAGCGCTGC GCGCCAAGAT CAAGCCTGAA
CTCATCGAGG CAATCCATCG CCTGAGCACT GCGCTTGCCG CGCGCGCCTC CCAGGATCTG
GATTCCATCG TCGATCTCTG CATCAACAGC AACGAGGCCT CGATCAGCGC CGCGCGCCTG
ATCGGCGCCT CGAACAATCA ATCGGAGCGC TGCCAGAGTC TTGCCTCCGC GTCGGTCGAG
CTGCAGGCCT CGGTCCAGAC CATCAGCGCG ACGACGACCG TAGCAGCCAA TGAGGCGGCC
GCGACCAGGC GGGCGGTGGA GGATAGCGTG ACGGCGGTGC GTCACACGCT GCAGACCATG
AACGGAATTG CGAGCTCGGT GCGGGACACC TCGTCCAAGA TCGCCGATCT CAGCGCGGCC
TCGGCAGAGA TCGGCTCGAT CGTCGGCACC ATCGATGCGA TCGCCAATCA GACCAATCTG
CTGGCGCTGA ACGCCACCAT CGAAGCCGCA CGCGCGGGCG AGTTCGGCAG GGGTTTTGCC
GTCGTCGCCG CCGAGGTGAA GAACCTGTCA CAGCAGACCA CGAAGGCCAC CGAGGACATC
AAGGGCCGCA TCGAACGGCT GCAGGCGGAG ATGAGCGGCA TCGTCGAGGC GATGGCCGGC
GGAGCCAAGG CCGTCGAGAT CGGCATGACC GAAATGACCA ATCTGGCACA GACCATCGAC
GAGGCCGGAA CCCGCACCGC CATGGTCAGC GCCAAGATGG ACGAGATCTC CGGCATTCTC
ACCGAGCAGA ACGCGGCCAC CGACGAGGTG GCGCAGGGCA TCACCCTCAT CGCGGATCTG
GCCACGGCCA ATGCGAACGA GGTGATGTCG CTGGCCGACA CGATGGGCAA GACCGATGCG
AAGGTCGGCA ACATGCTGAA CGAGATCGCC AAGCTCTCAC TCGACAATCA GGTGGTGCGG
CTCGCCAAGG CCGACCACGT GATCTGGAAG AAGCGGCTGG TCGACATGTC CGTCGGTCGG
CTGCAGCTCA GGACCGACGA ACTCAGTGAC CATCACAATT GCCGTCTCGG CAAATGGTAC
TATGGCGAGG CCGGCCAGCG CCTCGCCGGC GACGCCGCAT TCCGCCGCCT CGAACGCCCG
CATGAAGCGG TGCACCGCCA CGGCAAGGAA GCCGCGCGGC TGTTCAGCGC GGGCCACATC
GACGAGGCGC TCAACGAGAT CGGCAAGGTC GAGATCGCCT CGACCGAGGT GCTGGCGGCG
CTGGATCAGA TCAGAGTATA A
 
Protein sequence
MLGFRSRKND QTDAPALLDA ALEAFQDTLA QCLDDWAAGK LDRDVADLNA AALRAKIKPE 
LIEAIHRLST ALAARASQDL DSIVDLCINS NEASISAARL IGASNNQSER CQSLASASVE
LQASVQTISA TTTVAANEAA ATRRAVEDSV TAVRHTLQTM NGIASSVRDT SSKIADLSAA
SAEIGSIVGT IDAIANQTNL LALNATIEAA RAGEFGRGFA VVAAEVKNLS QQTTKATEDI
KGRIERLQAE MSGIVEAMAG GAKAVEIGMT EMTNLAQTID EAGTRTAMVS AKMDEISGIL
TEQNAATDEV AQGITLIADL ATANANEVMS LADTMGKTDA KVGNMLNEIA KLSLDNQVVR
LAKADHVIWK KRLVDMSVGR LQLRTDELSD HHNCRLGKWY YGEAGQRLAG DAAFRRLERP
HEAVHRHGKE AARLFSAGHI DEALNEIGKV EIASTEVLAA LDQIRV