More than 300 homologs were found in PanDaTox collection
for query gene BBta_5250 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_5250  hypothetical protein  100 
 
 
466 aa  929    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.869882  normal  0.134387 
 
 
-
 
NC_007778  RPB_3522  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
471 aa  313  2.9999999999999996e-84  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.392623  normal  0.542302 
 
 
-
 
NC_008789  Hhal_2165  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
470 aa  215  9.999999999999999e-55  Halorhodospira halophila SL1  Bacteria  normal  0.623772  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
658 aa  180  4e-44  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  32.74 
 
 
645 aa  178  1e-43  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  36.29 
 
 
674 aa  173  5.999999999999999e-42  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
700 aa  171  3e-41  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
700 aa  161  3e-38  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_011830  Dhaf_4430  methyl-accepting chemotaxis sensory transducer  30.47 
 
 
641 aa  154  4e-36  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  28.71 
 
 
664 aa  154  5e-36  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_007005  Psyr_2188  histidine kinase  36.61 
 
 
540 aa  144  3e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.035953  normal 
 
 
-
 
NC_010505  Mrad2831_4648  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
414 aa  140  6e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.087359 
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  40.54 
 
 
563 aa  135  9.999999999999999e-31  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_010725  Mpop_2766  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
457 aa  134  3e-30  Methylobacterium populi BJ001  Bacteria  normal  normal  0.626967 
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  40.28 
 
 
544 aa  132  1.0000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0614  methyl-accepting chemotaxis sensory transducer  30.19 
 
 
429 aa  132  1.0000000000000001e-29  Clostridium phytofermentans ISDg  Bacteria  normal  0.0371385  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  38.97 
 
 
528 aa  132  2.0000000000000002e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_010172  Mext_2643  chemotaxis sensory transducer  36.4 
 
 
457 aa  132  2.0000000000000002e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.861208 
 
 
-
 
NC_011757  Mchl_2869  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
457 aa  132  2.0000000000000002e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.394576  normal 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  31.53 
 
 
569 aa  129  9.000000000000001e-29  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  41.47 
 
 
542 aa  128  2.0000000000000002e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1021  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
518 aa  128  2.0000000000000002e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
661 aa  129  2.0000000000000002e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
544 aa  128  3e-28  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
550 aa  127  3e-28  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
543 aa  127  4.0000000000000003e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
557 aa  127  5e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.37 
 
 
1170 aa  125  1e-27  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1636  methyl-accepting chemotaxis sensory transducer  26.33 
 
 
456 aa  125  1e-27  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000322642  n/a   
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
423 aa  125  2e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  33.67 
 
 
547 aa  125  2e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
565 aa  125  2e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
549 aa  124  3e-27  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  39.9 
 
 
467 aa  124  3e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
540 aa  124  5e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  37.66 
 
 
541 aa  123  8e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  38.57 
 
 
549 aa  123  9e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
547 aa  122  9.999999999999999e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_011146  Gbem_0040  methyl-accepting chemotaxis sensory transducer  32.63 
 
 
515 aa  122  9.999999999999999e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0039  methyl-accepting chemotaxis sensory transducer  32.24 
 
 
515 aa  122  9.999999999999999e-27  Geobacter sp. M21  Bacteria  n/a    normal  0.0381098 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  36.32 
 
 
696 aa  121  1.9999999999999998e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02691  hypothetical protein  32.76 
 
 
535 aa  122  1.9999999999999998e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
547 aa  122  1.9999999999999998e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_3312  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
533 aa  121  1.9999999999999998e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2857  methyl-accepting chemotaxis sensory transducer  31.94 
 
 
392 aa  121  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  normal  0.0205381  n/a   
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
542 aa  121  3e-26  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  34.52 
 
 
546 aa  121  3e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  40.1 
 
 
544 aa  121  3e-26  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  34.65 
 
 
549 aa  121  3e-26  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.52 
 
 
546 aa  120  4.9999999999999996e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
540 aa  120  4.9999999999999996e-26  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  42.94 
 
 
549 aa  120  6e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
570 aa  120  6e-26  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  33.85 
 
 
535 aa  120  6e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  37.44 
 
 
549 aa  120  7e-26  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
538 aa  119  9e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
666 aa  119  9.999999999999999e-26  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  29.74 
 
 
678 aa  119  9.999999999999999e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_009656  PSPA7_2644  chemotaxis transducer  41.92 
 
 
280 aa  119  9.999999999999999e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.120039  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
698 aa  119  1.9999999999999998e-25  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  39.73 
 
 
550 aa  118  1.9999999999999998e-25  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_010814  Glov_0882  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
540 aa  119  1.9999999999999998e-25  Geobacter lovleyi SZ  Bacteria  normal  0.566239  n/a   
 
 
-
 
NC_008346  Swol_0971  putative methyl-accepting chemotaxis sensory transducer  29.54 
 
 
777 aa  119  1.9999999999999998e-25  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271758  n/a   
 
 
-
 
NC_012918  GM21_1357  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
392 aa  118  1.9999999999999998e-25  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.9116599999999996e-27 
 
 
-
 
NC_008609  Ppro_3058  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
518 aa  117  3e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  37.39 
 
 
533 aa  117  3.9999999999999997e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  33.88 
 
 
541 aa  117  3.9999999999999997e-25  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.69 
 
 
630 aa  117  3.9999999999999997e-25  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  37.02 
 
 
539 aa  117  5e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0394  methyl-accepting chemotaxis sensory transducer  30.75 
 
 
452 aa  117  5e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.716667 
 
 
-
 
NC_009997  Sbal195_0827  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
529 aa  117  6e-25  Shewanella baltica OS195  Bacteria  normal  normal  0.456094 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
625 aa  117  6e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_007517  Gmet_0799  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
388 aa  116  6.9999999999999995e-25  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0795  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
529 aa  116  6.9999999999999995e-25  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  35.69 
 
 
628 aa  116  6.9999999999999995e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
537 aa  116  6.9999999999999995e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0820  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
529 aa  116  7.999999999999999e-25  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00000000219782 
 
 
-
 
NC_008609  Ppro_2998  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
549 aa  116  8.999999999999998e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  38.46 
 
 
543 aa  116  1.0000000000000001e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2857  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
520 aa  116  1.0000000000000001e-24  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.000607785  n/a   
 
 
-
 
NC_011126  HY04AAS1_1329  methyl-accepting chemotaxis sensory transducer  29.05 
 
 
473 aa  116  1.0000000000000001e-24  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3564  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
529 aa  116  1.0000000000000001e-24  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.11 
 
 
888 aa  115  1.0000000000000001e-24  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
540 aa  115  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
628 aa  116  1.0000000000000001e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2961  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
542 aa  115  2.0000000000000002e-24  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  32.07 
 
 
572 aa  115  2.0000000000000002e-24  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
539 aa  115  2.0000000000000002e-24  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  36.97 
 
 
539 aa  114  3e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  38.11 
 
 
518 aa  114  3e-24  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
620 aa  114  3e-24  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  36.4 
 
 
531 aa  114  3e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  36.3 
 
 
538 aa  114  3e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
662 aa  114  4.0000000000000004e-24  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
545 aa  114  4.0000000000000004e-24  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
540 aa  114  4.0000000000000004e-24  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_009654  Mmwyl1_0686  methyl-accepting chemotaxis sensory transducer  33.11 
 
 
551 aa  114  4.0000000000000004e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  38.25 
 
 
541 aa  114  5e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  33.9 
 
 
691 aa  114  5e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  36.29 
 
 
667 aa  114  5e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>