More than 300 homologs were found in PanDaTox collection
for query gene Mext_2643 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_2766  methyl-accepting chemotaxis sensory transducer  85.68 
 
 
457 aa  687    Methylobacterium populi BJ001  Bacteria  normal  normal  0.626967 
 
 
-
 
NC_011757  Mchl_2869  methyl-accepting chemotaxis sensory transducer  98.47 
 
 
457 aa  874    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.394576  normal 
 
 
-
 
NC_010172  Mext_2643  chemotaxis sensory transducer  100 
 
 
457 aa  884    Methylobacterium extorquens PA1  Bacteria  normal  normal  0.861208 
 
 
-
 
NC_010511  M446_0394  methyl-accepting chemotaxis sensory transducer  45.06 
 
 
452 aa  264  2e-69  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.716667 
 
 
-
 
NC_011894  Mnod_6046  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
452 aa  253  7e-66  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.890066  n/a   
 
 
-
 
NC_010505  Mrad2831_4648  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
414 aa  191  2e-47  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.087359 
 
 
-
 
NC_009485  BBta_5250  hypothetical protein  36.4 
 
 
466 aa  137  5e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.869882  normal  0.134387 
 
 
-
 
NC_007778  RPB_3522  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
471 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.392623  normal  0.542302 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
636 aa  132  1.0000000000000001e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  38.39 
 
 
639 aa  126  8.000000000000001e-28  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  38.76 
 
 
623 aa  123  8e-27  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  36.73 
 
 
770 aa  121  1.9999999999999998e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  36.16 
 
 
638 aa  120  7e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  32.68 
 
 
638 aa  118  1.9999999999999998e-25  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  39.44 
 
 
623 aa  118  1.9999999999999998e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  38.63 
 
 
686 aa  118  3e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.96 
 
 
523 aa  117  3.9999999999999997e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  39.91 
 
 
548 aa  116  6.9999999999999995e-25  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
505 aa  116  7.999999999999999e-25  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_003910  CPS_1267  methyl-accepting chemotaxis protein  36.11 
 
 
557 aa  115  1.0000000000000001e-24  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.64 
 
 
650 aa  116  1.0000000000000001e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
505 aa  115  1.0000000000000001e-24  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
505 aa  115  1.0000000000000001e-24  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
638 aa  114  2.0000000000000002e-24  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  37.68 
 
 
636 aa  115  2.0000000000000002e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
638 aa  115  2.0000000000000002e-24  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
638 aa  115  2.0000000000000002e-24  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  36.6 
 
 
642 aa  114  3e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A2757  chemotaxis sensory transducer  33.57 
 
 
591 aa  114  3e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
548 aa  114  3e-24  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  30.63 
 
 
505 aa  114  4.0000000000000004e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_2738  methyl-accepting chemotaxis sensory transducer  40 
 
 
562 aa  114  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.809654  normal  0.020868 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  38.5 
 
 
533 aa  114  5e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
698 aa  113  6e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
638 aa  113  9e-24  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
638 aa  113  9e-24  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
638 aa  113  9e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
641 aa  112  1.0000000000000001e-23  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
639 aa  112  1.0000000000000001e-23  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
638 aa  111  2.0000000000000002e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
639 aa  111  2.0000000000000002e-23  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
562 aa  112  2.0000000000000002e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
428 aa  111  2.0000000000000002e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  36.17 
 
 
638 aa  112  2.0000000000000002e-23  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  40.44 
 
 
545 aa  112  2.0000000000000002e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.86 
 
 
527 aa  112  2.0000000000000002e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  37.14 
 
 
559 aa  111  3e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
506 aa  111  3e-23  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  40.48 
 
 
563 aa  111  3e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
561 aa  111  3e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
653 aa  111  3e-23  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
434 aa  111  3e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
567 aa  110  4.0000000000000004e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
506 aa  110  4.0000000000000004e-23  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
506 aa  110  4.0000000000000004e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
506 aa  110  4.0000000000000004e-23  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
639 aa  110  4.0000000000000004e-23  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  39.05 
 
 
568 aa  110  5e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
670 aa  110  5e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0671  putative methyl-accepting chemotaxis sensory transducer  34.75 
 
 
531 aa  110  5e-23  Saccharophagus degradans 2-40  Bacteria  normal  0.178659  hitchhiker  0.000000219808 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
568 aa  110  6e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  35.81 
 
 
516 aa  110  6e-23  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
566 aa  110  6e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  33.85 
 
 
586 aa  110  6e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  34.55 
 
 
554 aa  110  6e-23  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  36.63 
 
 
573 aa  110  8.000000000000001e-23  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  40 
 
 
561 aa  109  8.000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_010511  M446_3427  methyl-accepting chemotaxis sensory transducer  40 
 
 
568 aa  109  8.000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0133436 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  33.64 
 
 
696 aa  109  9.000000000000001e-23  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
502 aa  109  9.000000000000001e-23  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
531 aa  109  9.000000000000001e-23  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  35.25 
 
 
625 aa  109  1e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
563 aa  108  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
639 aa  109  1e-22  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  37.91 
 
 
676 aa  109  1e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  38.35 
 
 
698 aa  109  1e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
562 aa  109  1e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_011832  Mpal_2271  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.88 
 
 
1104 aa  109  1e-22  Methanosphaerula palustris E1-9c  Archaea  normal  0.292314  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  40.09 
 
 
656 aa  108  1e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  37.21 
 
 
550 aa  108  2e-22  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009253  Dred_1557  methyl-accepting chemotaxis sensory transducer  36.92 
 
 
530 aa  108  2e-22  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
499 aa  108  2e-22  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009485  BBta_7506  putative methyl-accepting chemotaxis protein  38.81 
 
 
671 aa  108  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1021  methyl-accepting chemotaxis sensory transducer  34.71 
 
 
518 aa  107  3e-22  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  34.03 
 
 
548 aa  108  3e-22  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
563 aa  107  3e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  39.01 
 
 
602 aa  107  3e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2299  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
182 aa  108  3e-22  Maricaulis maris MCS10  Bacteria  normal  normal  0.741118 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  40.57 
 
 
656 aa  108  3e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
546 aa  107  4e-22  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  33.48 
 
 
672 aa  107  4e-22  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
560 aa  107  5e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_011894  Mnod_5243  methyl-accepting chemotaxis sensory transducer  42.08 
 
 
562 aa  107  5e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
626 aa  107  5e-22  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  40.1 
 
 
565 aa  107  6e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  31.6 
 
 
473 aa  107  6e-22  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
394 aa  107  6e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
643 aa  107  6e-22  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  36.21 
 
 
566 aa  107  6e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  35.59 
 
 
693 aa  107  6e-22  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
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