| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2271 |
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| Symbol | |
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| ID | 7272569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2423514 |
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| End bp | 2426828 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643570880 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002467283 |
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| Protein GI | 219852851 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.292314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA TAGAACAATT TAGCGGGGTG GGACTCGAAG AATCTTCCTT TCAGCATCAG
CAGGAACTGC AAAAGGTCTT CGACGCAATC GAAGTGCCGA TCATCCGGAC CGACTGCGAC
CAACATGTAC TGGGATTGAA CCGTGCGGCC TCGGTGTTCA TCGGTTTTAA GCCCGAGGAT
TGTATAGGCC AGACCTGCGA CACGCTCTTC AACCTGAACG GGTCGACCCG TGGAAGGGGG
ACGATTCAGC GTGCGATGAC GATGGCAGAG TCCCAGGTCG CCGATACGGT GATCTCTCCG
GGGGGGAGGG AGATCCCGAT CCGATTCCAG GCCACGCCAC TCTTCGATGC CAGGGGGGAG
GTGAGCGGAA CTATCAACTA TCTTATCCGC GATCTCTCCG AGGAGAAGGA ACTCCTCTCA
CAGATCTGGG ACCTTGCTGG GCGTCTCGCT GCCGGGGACC TCGATGCACG CATGGCCCCG
GGAAAGCCCG ACACCATCCA AGCCGATGCC ATCGACGCGA TCAATGGGAT CGTGAACCTG
CTGGCCGGGC AGGTGCAAAA TATAACCGCG CAGGCAGATC TCTCCAGATT TTTTGCAGAT
GAGGTTGCGA AGGTCAATAC TAGCATCTGT CACCTGGCAG ATGGGTCGTT GGATCTGGAT
TTATCGATCG GGCCGACCGA TTCGACCACG GCCCGGGCAG GGGAGCAGTT CATTGGGATC
AATCGGGAGA TCGCCCGGGT AGCTGCCTCG CTCACCCATC TGGTGAGCGA AATTGATGAA
CTGGAGACGG CCATTGTTCA CGGCCGTTTT GGCGTCCGGG CCGGGGATCA GGACCATCTG
GGAGTCTACC GCTCGGCGAT CGGGGGCGTG AACACCACCC TCGATGCGCT GGTCAGGTAT
TTCGATCAGA TGCCGACCTC GATCTTTACC ATCGATAATG AGTGTAGGAT CCAGTACATC
AACAGGCATG CAGCTGCAAT TGGAGGGGTC TCCCCACAGC AAGCTATCGG GATGCCATGT
GCTGAGGTCG TCCATGCTGA TGCATGTGGA ACCAGTGGAT GTGTCGCCCA GCAGTGCTTA
TTGCAGCATC ATAATGTGAA GGCTGAGACG GTGGCACGAC CGCGGGGACT GACCTTTGAG
ATCGATGTCA CCGGGATCCC GATCCTAGAC CGGCACGGTC AGGTCGTCGG ATCGATGGAG
TTCATCAGGG ACATGACCGC CGAGAAGACT GCAACTAGGA CTGCAGAGAA GCAGGCCCTT
TATCAGGATA GGGAGGTGAA GAAGGTTGTG GAGGTGCTCG GAAAGATTGC TGGCGGTGAT
CTGGTAATCC CGTCTGCGAT CGCCCCTGCA GATGAGGACA CACAGGTCAT TGCCCAGGAC
TTTGATGAGA TCAACCATGC CATCTCCCAG ACCGTCGGCA ACCTCAATGC ACTCGTCGCC
GATGCGACGA TGCTCTCGGT GGCCGCTGTT GAAGGCAGGC TCGCCACCCG GGCGGATGCA
ACCCGGCACC AGGGAGACTT CAGACATATC ATCGAAGGGG TCAACGGAAC GCTCGATGAA
CTGATCCGTG GGTTGCATAT TGCATCCGAT TCGGTCAGTC TGATCGGGAG GGGCGTGATC
CCTGAACGGA TCACCGCCGG GATGTCGGGC GAGTTCGATG ACCTCAAAAA CAACCTGAAT
GCCTGCATCG ACGGTCTCAG TGGGCTGGTT GAGGTGAACG CTGTCCTCAA ACGGATGGCG
GTGAACGACC ACAGTACAGA GGTGAAAGGG AACTACCCGG GTCTCTTTGG GGAGGTCAAG
GTTCATGTCA ACACGGTTCG GGACCGGTTC AACCATATCG CCGGCTCGAT CGAGAAGATC
GGCAATGGCG ACCTTAGTGA GTATCAGGAG TACCGCACTA TTGGAAAGCG TTCAGAGCAG
GATAGGTTGG TTCCGGGGCT CACACGGACC CTCGATCATC TGCAGGGGCT GACCGATGAT
GCAGGGATGC TCGCCAGAGC GTCCGTCGAA GGCAGGCTAG AAACCCGGGC GGATGCTTCA
AAGCACGAGG GAAATTACCG GAAGATCGTC GACGGCGTCA ACCAGACTCT CGATGCTGTG
ATAGCCCCGC TGAACGAGGC GAGGCGGGTC TCGCGGGACT ATGCCGAGGG ATCGTTCTCC
ACCCGGATGG ATCGGTCCAT TCCGATGGCC GGCGATTTCC TCGAGTTCCG GGAGGCGCTC
GACAACATAG GGGTTCGGGT AAGTGCTGCC ATTGGTGCCA TCTCCCAGGT CTCTTCTGCC
TACGCAGGCT GCGATTTCAC GAGCAGGGTC GATCCGGCCG TCCACCTGGC CGGCGACTTC
GTGACGATGG GCAAGGCACT GAACAGCATT GGTGTCGAGG TGTCTGAGGC ATTCAGGGTC
ACCAGGGACC AGATCCATGA TCTGAACGAG GACCTGACGG GGGTCGGGGC ACAGGTCGAG
GAGATCAGCA GGGGTGCCCA GCAGGTCGCC GTCTCGACGA TCGATGTCAG TGCGAACACC
GAAAAGGCGA TGCTCGGGAC ACAGCAGGTG CTGCATGCGA TGGAGGATAT ATCCGCGGCC
GTCGAGGAGG TGACCGCTTC GATGGAATCG GTTGCCGTCC TCGCCAAGCA GACTGAATTC
CTCTCTAAGG ACGGTGTTGT CCTGGCCGGG AAAGCGGAGG CGAGTATGGA TGCGATCGGG
AATGCCGGGA ATGAGGCCGG TCGGATCGTC AACGAGATCG GAATGCAGAT GAACGACATC
GGCAAGATCG TCAAGATCAT CAGGGAACTG GCCAGTCAGA CCAACCTGCT CGCCCTGAAC
GCAGCCATCG AGGCCGCCCG GGCAGGAGAA CACGGTCGCG GGTTTGCGGT GGTCGCCGCA
GAGGTTAAAT CTCTGGCCCA GGAGTCGAGG GGCTCTGCAG AGCACATCGA GGAACTGATC
ACTGGTCTCC GATCCCGATC AGAGGAGGCG TTGATCGCAA TGAACGAGAC GAGTACCCTG
ATCGAGCAGG GAGACCTGGT TCTCGACGAG ACACTTCAAT CATTCAACAA GATCGTAGAG
TCGGTCCAGA AGATCTCACA GAACACCGAG GAGGTGGCCA GCGCCACTGA GGAACAGGCT
GCGGCGGTCC AGGAGATCAC GGCCAGCATC CATGAGGTGA CCTCACAGAT CGAGGAGACG
AGCAGGGACT CGACCGATGT AGCCAGCGCC ACCGAGGAGT CGACAGCGTC GATCGAGGAG
ATCAGCCGGA TGATCGGCGA GGCGAAGAAC TCTTCAGAAC GGATCCGTGG TGAGATTGCC
ATCTTTCGGG TGTGA
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| Protein sequence | MAKIEQFSGV GLEESSFQHQ QELQKVFDAI EVPIIRTDCD QHVLGLNRAA SVFIGFKPED
CIGQTCDTLF NLNGSTRGRG TIQRAMTMAE SQVADTVISP GGREIPIRFQ ATPLFDARGE
VSGTINYLIR DLSEEKELLS QIWDLAGRLA AGDLDARMAP GKPDTIQADA IDAINGIVNL
LAGQVQNITA QADLSRFFAD EVAKVNTSIC HLADGSLDLD LSIGPTDSTT ARAGEQFIGI
NREIARVAAS LTHLVSEIDE LETAIVHGRF GVRAGDQDHL GVYRSAIGGV NTTLDALVRY
FDQMPTSIFT IDNECRIQYI NRHAAAIGGV SPQQAIGMPC AEVVHADACG TSGCVAQQCL
LQHHNVKAET VARPRGLTFE IDVTGIPILD RHGQVVGSME FIRDMTAEKT ATRTAEKQAL
YQDREVKKVV EVLGKIAGGD LVIPSAIAPA DEDTQVIAQD FDEINHAISQ TVGNLNALVA
DATMLSVAAV EGRLATRADA TRHQGDFRHI IEGVNGTLDE LIRGLHIASD SVSLIGRGVI
PERITAGMSG EFDDLKNNLN ACIDGLSGLV EVNAVLKRMA VNDHSTEVKG NYPGLFGEVK
VHVNTVRDRF NHIAGSIEKI GNGDLSEYQE YRTIGKRSEQ DRLVPGLTRT LDHLQGLTDD
AGMLARASVE GRLETRADAS KHEGNYRKIV DGVNQTLDAV IAPLNEARRV SRDYAEGSFS
TRMDRSIPMA GDFLEFREAL DNIGVRVSAA IGAISQVSSA YAGCDFTSRV DPAVHLAGDF
VTMGKALNSI GVEVSEAFRV TRDQIHDLNE DLTGVGAQVE EISRGAQQVA VSTIDVSANT
EKAMLGTQQV LHAMEDISAA VEEVTASMES VAVLAKQTEF LSKDGVVLAG KAEASMDAIG
NAGNEAGRIV NEIGMQMNDI GKIVKIIREL ASQTNLLALN AAIEAARAGE HGRGFAVVAA
EVKSLAQESR GSAEHIEELI TGLRSRSEEA LIAMNETSTL IEQGDLVLDE TLQSFNKIVE
SVQKISQNTE EVASATEEQA AAVQEITASI HEVTSQIEET SRDSTDVASA TEESTASIEE
ISRMIGEAKN SSERIRGEIA IFRV
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