| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1214 |
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| Symbol | |
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| ID | 4278028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1424345 |
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| End bp | 1425928 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133989 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_749905 |
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| Protein GI | 114562392 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAATA ATCAACCCGT TACCCTCAAT CAGTACAACT TCGATGATGC TCTTCGTTTA
ATTTCAGGAA CCGATCTGCG CGGCCATATT ACCTATTGTA ATGATGCTTT TGTTGAGGTC
AGCGGCTTTG AAAAAAGTGA GTTAATCGGT AAACCACATA ACCTTGTGCG TCATCCAGAC
ATGCCAAGTG AAGTATTTAA AGATATGTGG GCATGTATCT CAAGCGGTAA AGTGTGGATG
GGACTGGTTA AGAATCGTCG TAAAAATGGT GATTATTATT GGGTTAGCGC ATTTGTTACT
CCAGTATTCG AAAATAATAA AATAGCAGGT TACGAGTCTG TTAGGGTTAC TGCATTACCA
AGTGAAATTG CCCGTGCTGA AGCGGCTTAT GCCAGAATAA AAGCTAATAA GTCACCAAGA
CCACTTCATG CAAAAATAAA ACATCAAGTA ATTAAATTAT TACCCGCATG GTTACCAATG
TTTATTTTGT CCATTGTATT AACTGAGTTC TGGGGGGGTG TGCCTGGTGC AATGGGTTTA
TTCACCCTTG TATTATCAAC GGCTTGGTTG GGCTATAAAC AGCAACAAGA TTGGTATGAA
GTCGTCAAAC TTAATCCTAA TTCGTTTACA GATCTCATTG TGGCAGAAAC CTATTTTGCT
GATTTTGGCG CTAAAGCGCA GGCAAAATTG GCTCTGGGTT GCGAAGTTGC TCGTTGTCGT
ACAGCGATGA CGCGTATTGA AGATGCTGCA AAATCATTAG ATGGCATTGT CGAGCACACT
CAACTTGAGG CTGAATCAAC GGCTAAAGCG GTAAGTTTAC AAAGTGTATC AACACAACAG
ATTGCTTCGG CAATTACCCA GATGTCTACA GCTATTCAAG AAGTGTCCGC TAATGTCGAG
CGTAATGCTT ACAGCGCAAA AGAAGCATTA GACAATGTTA CCGACGGAGC TCAACTGGCT
AATCAAGCTA AACAGTCTAT TGATGAATTA AATCTGTCTG TCGCGGATAT CGCTAAAACA
GTACGCGAGT TATCTGACTC TACAAATGAG ATCGGCCAAG CGGCCAGTCT TATTTCGAGT
ATTGCCGACC AAACCAATTT GTTGGCCTTA AATGCCGCGA TTGAAGCCGC AAGGGCGGGG
GAACAAGGTC GTGGATTCAG CGTTGTTGCA GATGAAGTAC GTTCCCTAGC ACTGAAAACT
CGAGAATCGA CCGATAGAAT TCACAGCATA GTGAGTGTAC TAACGAAGCG AGCCAGTAAT
GCCGTTCAAG TGTCGGTTAG GGGGGAGCAA GCAGCCAGTA AAGGTGTTGA GATTGTTGAT
AAAACGCGTA ACGCATTAGC GTCGATTAAC CAATCCGTTG AACAAATCAC CCAACTTACC
TTAGATATGT CTGCGGCGGT AGAGCAGCAG AGTGCAGTCG CTGAGCATAT TAATCAGCAA
ATTATTGATA TTGCAGATTC TGCAGAAATT ACTAAAGCTT CATCAGAAAA ATCGTTACAT
AACAGCAGTG AATTGGGCCA GTCAGTGTTG ATGGTTCGAT CTATTATTAG GCGTTTTGCT
GTAGGGACAT TAGGTAAGAA ATAG
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| Protein sequence | MRNNQPVTLN QYNFDDALRL ISGTDLRGHI TYCNDAFVEV SGFEKSELIG KPHNLVRHPD
MPSEVFKDMW ACISSGKVWM GLVKNRRKNG DYYWVSAFVT PVFENNKIAG YESVRVTALP
SEIARAEAAY ARIKANKSPR PLHAKIKHQV IKLLPAWLPM FILSIVLTEF WGGVPGAMGL
FTLVLSTAWL GYKQQQDWYE VVKLNPNSFT DLIVAETYFA DFGAKAQAKL ALGCEVARCR
TAMTRIEDAA KSLDGIVEHT QLEAESTAKA VSLQSVSTQQ IASAITQMST AIQEVSANVE
RNAYSAKEAL DNVTDGAQLA NQAKQSIDEL NLSVADIAKT VRELSDSTNE IGQAASLISS
IADQTNLLAL NAAIEAARAG EQGRGFSVVA DEVRSLALKT RESTDRIHSI VSVLTKRASN
AVQVSVRGEQ AASKGVEIVD KTRNALASIN QSVEQITQLT LDMSAAVEQQ SAVAEHINQQ
IIDIADSAEI TKASSEKSLH NSSELGQSVL MVRSIIRRFA VGTLGKK
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