More than 300 homologs were found in PanDaTox collection
for query gene VIBHAR_02986 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009783  VIBHAR_02986  hypothetical protein  100 
 
 
377 aa  756    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0350  toxin co-regulated pilus biosynthesis protein I  40.85 
 
 
620 aa  185  1.0000000000000001e-45  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3672  methyl-accepting chemotaxis sensory transducer  44.98 
 
 
619 aa  180  2.9999999999999997e-44  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1434  methyl-accepting chemotaxis protein  44.54 
 
 
543 aa  169  7e-41  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2017  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
543 aa  168  2e-40  Shewanella sp. ANA-3  Bacteria  normal  0.75882  hitchhiker  0.00000661881 
 
 
-
 
NC_011313  VSAL_II0170  methyl-accepting chemotaxis protein  36.53 
 
 
543 aa  165  2.0000000000000002e-39  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0070  methyl-accepting chemotaxis protein  39.03 
 
 
547 aa  158  2e-37  Vibrio cholerae O395  Bacteria  normal  0.740118  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  30.54 
 
 
541 aa  156  6e-37  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  32.1 
 
 
546 aa  155  8e-37  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
632 aa  152  1e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  32.61 
 
 
650 aa  152  1e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  32.54 
 
 
558 aa  151  2e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  29.78 
 
 
564 aa  150  3e-35  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  32.1 
 
 
558 aa  150  4e-35  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  35.22 
 
 
638 aa  149  6e-35  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  31.52 
 
 
672 aa  149  7e-35  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001231  methyl-accepting chemotaxis protein  32.58 
 
 
542 aa  148  1.0000000000000001e-34  Vibrio sp. Ex25  Bacteria  normal  0.554422  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  31.99 
 
 
653 aa  148  2.0000000000000003e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  32.84 
 
 
673 aa  147  2.0000000000000003e-34  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  30.6 
 
 
638 aa  147  3e-34  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
572 aa  147  4.0000000000000006e-34  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  37.92 
 
 
547 aa  146  5e-34  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  32.94 
 
 
638 aa  146  6e-34  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
673 aa  146  7.0000000000000006e-34  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
674 aa  144  2e-33  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
638 aa  144  2e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_011312  VSAL_I1636  methyl-accepting chemotaxis protein  38.19 
 
 
547 aa  144  2e-33  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  28.88 
 
 
637 aa  145  2e-33  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  32.2 
 
 
638 aa  144  2e-33  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  33.13 
 
 
542 aa  144  3e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
672 aa  143  4e-33  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_009456  VC0395_0265  methyl-accepting chemotaxis protein  30.89 
 
 
561 aa  143  4e-33  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.72 
 
 
524 aa  143  4e-33  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.42 
 
 
523 aa  143  4e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  30 
 
 
712 aa  143  5e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
638 aa  142  8e-33  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
638 aa  142  9e-33  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
638 aa  142  9.999999999999999e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  37.12 
 
 
638 aa  142  9.999999999999999e-33  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  32.74 
 
 
554 aa  142  9.999999999999999e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  32.95 
 
 
547 aa  142  9.999999999999999e-33  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  31.94 
 
 
830 aa  141  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
638 aa  141  1.9999999999999998e-32  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
540 aa  141  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  29.64 
 
 
712 aa  141  1.9999999999999998e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  33.33 
 
 
639 aa  140  3e-32  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  33.89 
 
 
575 aa  140  3e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  35.69 
 
 
653 aa  140  3.9999999999999997e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
674 aa  140  3.9999999999999997e-32  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  32 
 
 
639 aa  140  3.9999999999999997e-32  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_011313  VSAL_II0675  methyl-accepting chemotaxis protein  34.97 
 
 
542 aa  140  3.9999999999999997e-32  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0486909  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.5 
 
 
626 aa  139  6e-32  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_003910  CPS_4711  methyl-accepting chemotaxis protein  33.33 
 
 
633 aa  139  7e-32  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.29 
 
 
524 aa  139  7e-32  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  31.64 
 
 
541 aa  139  7.999999999999999e-32  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
499 aa  139  7.999999999999999e-32  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
707 aa  139  8.999999999999999e-32  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  28.85 
 
 
548 aa  139  8.999999999999999e-32  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  33.56 
 
 
543 aa  138  1e-31  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  30.79 
 
 
716 aa  139  1e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
773 aa  139  1e-31  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  32.77 
 
 
559 aa  139  1e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.19 
 
 
626 aa  139  1e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2672  putative chemotaxis transducer  33.61 
 
 
538 aa  137  2e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.119833  n/a   
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  30.05 
 
 
663 aa  138  2e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  33.53 
 
 
642 aa  138  2e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  39.42 
 
 
521 aa  138  2e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.34 
 
 
626 aa  137  2e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
630 aa  138  2e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
554 aa  137  2e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_013422  Hneap_0470  methyl-accepting chemotaxis sensory transducer  29.97 
 
 
668 aa  137  3.0000000000000003e-31  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
524 aa  137  3.0000000000000003e-31  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
688 aa  137  3.0000000000000003e-31  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  31.17 
 
 
633 aa  137  3.0000000000000003e-31  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
673 aa  137  3.0000000000000003e-31  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
673 aa  137  3.0000000000000003e-31  Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30 
 
 
524 aa  137  3.0000000000000003e-31  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
638 aa  137  3.0000000000000003e-31  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  31.48 
 
 
541 aa  137  3.0000000000000003e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
620 aa  137  3.0000000000000003e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  32 
 
 
673 aa  137  3.0000000000000003e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
620 aa  137  3.0000000000000003e-31  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.28 
 
 
521 aa  137  3.0000000000000003e-31  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
673 aa  137  4e-31  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
495 aa  137  4e-31  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
675 aa  137  4e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
638 aa  137  4e-31  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
673 aa  137  4e-31  Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  34.98 
 
 
672 aa  136  5e-31  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  40.18 
 
 
521 aa  136  5e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
638 aa  136  5e-31  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  31.13 
 
 
620 aa  136  5e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
636 aa  136  5e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
524 aa  136  5e-31  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
495 aa  136  6.0000000000000005e-31  Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  32.07 
 
 
698 aa  136  6.0000000000000005e-31  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
495 aa  136  6.0000000000000005e-31  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  31.63 
 
 
620 aa  136  6.0000000000000005e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
622 aa  136  6.0000000000000005e-31  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  30.79 
 
 
673 aa  136  6.0000000000000005e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
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