More than 300 homologs were found in PanDaTox collection
for query gene Pmen_1210 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009512  Pput_3621  methyl-accepting chemotaxis sensory transducer  66.73 
 
 
555 aa  647    Pseudomonas putida F1  Bacteria  normal  normal  0.30858 
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  66.73 
 
 
575 aa  637    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  67.76 
 
 
559 aa  660    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  100 
 
 
540 aa  1069    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  70.45 
 
 
540 aa  666    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_010501  PputW619_1637  methyl-accepting chemotaxis sensory transducer  65.99 
 
 
538 aa  638    Pseudomonas putida W619  Bacteria  normal  0.662156  normal 
 
 
-
 
NC_010322  PputGB1_1660  methyl-accepting chemotaxis sensory transducer  65.56 
 
 
538 aa  636    Pseudomonas putida GB-1  Bacteria  normal  normal  0.170942 
 
 
-
 
NC_002947  PP_2120  methyl-accepting chemotaxis sensory transducer  65.56 
 
 
555 aa  631  1e-180  Pseudomonas putida KT2440  Bacteria  normal  normal  0.236845 
 
 
-
 
NC_009656  PSPA7_2672  putative chemotaxis transducer  67.1 
 
 
538 aa  634  1e-180  Pseudomonas aeruginosa PA7  Bacteria  normal  0.119833  n/a   
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  43.73 
 
 
539 aa  405  1e-111  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  39.32 
 
 
525 aa  341  2e-92  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
572 aa  302  1e-80  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  44.38 
 
 
712 aa  254  3e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.76 
 
 
523 aa  253  4.0000000000000004e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  44.09 
 
 
712 aa  252  1e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  42.49 
 
 
713 aa  244  1.9999999999999999e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.11 
 
 
640 aa  244  3e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  43.35 
 
 
650 aa  243  7e-63  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  39.76 
 
 
629 aa  242  1e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
716 aa  240  5e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  40.38 
 
 
640 aa  236  1.0000000000000001e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
640 aa  234  3e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
564 aa  233  5e-60  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.09 
 
 
637 aa  232  1e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
773 aa  231  2e-59  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  37.1 
 
 
640 aa  231  2e-59  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  37.8 
 
 
633 aa  231  3e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.32 
 
 
638 aa  230  5e-59  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_010002  Daci_5361  methyl-accepting chemotaxis sensory transducer  32.89 
 
 
508 aa  230  5e-59  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  40.7 
 
 
546 aa  230  6e-59  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
555 aa  230  6e-59  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  33.27 
 
 
541 aa  229  7e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  40.11 
 
 
641 aa  227  5.0000000000000005e-58  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
540 aa  227  5.0000000000000005e-58  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  43.77 
 
 
647 aa  226  7e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
639 aa  226  8e-58  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
511 aa  226  1e-57  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  42.66 
 
 
645 aa  225  2e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  32.62 
 
 
666 aa  225  2e-57  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  38.84 
 
 
541 aa  224  3e-57  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  43.58 
 
 
645 aa  224  3e-57  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_011138  MADE_02969  Methyl-accepting chemotaxis protein  29.14 
 
 
529 aa  224  3e-57  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0476708  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
638 aa  224  4e-57  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
674 aa  224  4e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
572 aa  223  6e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
541 aa  223  8e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
552 aa  223  9e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
638 aa  223  9.999999999999999e-57  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  44.09 
 
 
714 aa  221  1.9999999999999999e-56  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  32.41 
 
 
542 aa  222  1.9999999999999999e-56  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
638 aa  221  1.9999999999999999e-56  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.24 
 
 
619 aa  221  1.9999999999999999e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
552 aa  221  1.9999999999999999e-56  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  43.56 
 
 
624 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.34 
 
 
541 aa  221  1.9999999999999999e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
552 aa  221  1.9999999999999999e-56  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  32.41 
 
 
563 aa  221  3e-56  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  44.09 
 
 
714 aa  221  3e-56  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  44.54 
 
 
714 aa  221  3e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
620 aa  221  3e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.34 
 
 
636 aa  220  5e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  42.27 
 
 
553 aa  220  5e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  32.21 
 
 
542 aa  220  5e-56  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  32.21 
 
 
542 aa  220  5e-56  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
647 aa  220  5e-56  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  32.21 
 
 
542 aa  220  5e-56  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  38.78 
 
 
553 aa  220  6e-56  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  47.39 
 
 
679 aa  219  7e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  32.21 
 
 
661 aa  219  1e-55  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
568 aa  219  1e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  38.35 
 
 
638 aa  219  1e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
620 aa  219  1e-55  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  42.33 
 
 
543 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  40.38 
 
 
662 aa  218  2e-55  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  44.59 
 
 
647 aa  218  2e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  37.33 
 
 
640 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  32.21 
 
 
661 aa  218  2.9999999999999998e-55  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
637 aa  218  2.9999999999999998e-55  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
634 aa  217  4e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
647 aa  217  4e-55  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  38.5 
 
 
640 aa  217  4e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
739 aa  217  4e-55  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
656 aa  217  5e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
541 aa  216  5.9999999999999996e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
645 aa  216  7e-55  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
638 aa  216  9.999999999999999e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  37.08 
 
 
642 aa  215  9.999999999999999e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
645 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  32.6 
 
 
541 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  39.51 
 
 
639 aa  215  1.9999999999999998e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
645 aa  214  2.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  37.02 
 
 
620 aa  214  2.9999999999999995e-54  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  38.61 
 
 
642 aa  213  7e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007912  Sde_0671  putative methyl-accepting chemotaxis sensory transducer  42.27 
 
 
531 aa  213  7e-54  Saccharophagus degradans 2-40  Bacteria  normal  0.178659  hitchhiker  0.000000219808 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  32.51 
 
 
620 aa  213  7.999999999999999e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  38.69 
 
 
681 aa  213  7.999999999999999e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
545 aa  212  1e-53  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
830 aa  211  2e-53  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
620 aa  212  2e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.64 
 
 
548 aa  211  2e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
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