More than 300 homologs were found in PanDaTox collection
for query gene MADE_02969 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_02969  Methyl-accepting chemotaxis protein  100 
 
 
529 aa  1073    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0476708  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
572 aa  254  3e-66  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
525 aa  252  9.000000000000001e-66  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  30 
 
 
540 aa  229  7e-59  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  31.99 
 
 
539 aa  228  2e-58  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  29.96 
 
 
559 aa  219  1e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_009512  Pput_3621  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
555 aa  218  2e-55  Pseudomonas putida F1  Bacteria  normal  normal  0.30858 
 
 
-
 
NC_010322  PputGB1_1660  methyl-accepting chemotaxis sensory transducer  30.22 
 
 
538 aa  216  5.9999999999999996e-55  Pseudomonas putida GB-1  Bacteria  normal  normal  0.170942 
 
 
-
 
NC_002947  PP_2120  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
555 aa  214  1.9999999999999998e-54  Pseudomonas putida KT2440  Bacteria  normal  normal  0.236845 
 
 
-
 
NC_010501  PputW619_1637  methyl-accepting chemotaxis sensory transducer  28.52 
 
 
538 aa  214  3.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  0.662156  normal 
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  30.02 
 
 
540 aa  210  5e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  29.51 
 
 
575 aa  202  8e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_009656  PSPA7_2672  putative chemotaxis transducer  28.65 
 
 
538 aa  199  7.999999999999999e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  0.119833  n/a   
 
 
-
 
NC_003295  RSc1234  methyl-accepting chemotaxis transmembrane protein  31.06 
 
 
514 aa  194  3e-48  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  30.75 
 
 
563 aa  191  2e-47  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  30.75 
 
 
661 aa  192  2e-47  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  30.75 
 
 
661 aa  191  2.9999999999999997e-47  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  30.75 
 
 
542 aa  191  2.9999999999999997e-47  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  30.75 
 
 
542 aa  191  4e-47  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  30.75 
 
 
542 aa  191  4e-47  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  30.75 
 
 
542 aa  191  4e-47  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  30.4 
 
 
666 aa  189  2e-46  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  28.03 
 
 
511 aa  182  1e-44  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_010002  Daci_5361  methyl-accepting chemotaxis sensory transducer  29.28 
 
 
508 aa  177  3e-43  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  29.22 
 
 
579 aa  157  4e-37  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
705 aa  150  7e-35  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
705 aa  149  1.0000000000000001e-34  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  32.83 
 
 
640 aa  149  2.0000000000000003e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  30.84 
 
 
535 aa  148  3e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_007954  Sden_0911  chemotaxis sensory transducer  29 
 
 
705 aa  147  5e-34  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000403524  n/a   
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
541 aa  147  5e-34  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  32.53 
 
 
629 aa  146  9e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  31.11 
 
 
547 aa  145  2e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
544 aa  144  4e-33  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
672 aa  144  5e-33  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
544 aa  144  6e-33  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  32.94 
 
 
830 aa  143  7e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  32.01 
 
 
542 aa  143  9.999999999999999e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
706 aa  142  1.9999999999999998e-32  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  29.91 
 
 
541 aa  141  1.9999999999999998e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
706 aa  142  1.9999999999999998e-32  Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
706 aa  142  1.9999999999999998e-32  Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  31.27 
 
 
578 aa  142  1.9999999999999998e-32  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  33.92 
 
 
557 aa  141  3.9999999999999997e-32  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  30.61 
 
 
540 aa  140  4.999999999999999e-32  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
705 aa  140  7e-32  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  33.74 
 
 
543 aa  140  7.999999999999999e-32  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  30.99 
 
 
543 aa  140  7.999999999999999e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  29.29 
 
 
565 aa  140  7.999999999999999e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  35.03 
 
 
570 aa  139  8.999999999999999e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_004347  SO_1278  methyl-accepting chemotaxis protein  30.79 
 
 
706 aa  139  1e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  29.57 
 
 
693 aa  139  1e-31  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  31.65 
 
 
539 aa  138  2e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  30.96 
 
 
578 aa  138  2e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
540 aa  138  2e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
706 aa  138  2e-31  Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  29.92 
 
 
706 aa  138  3.0000000000000003e-31  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  30.61 
 
 
540 aa  138  3.0000000000000003e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
547 aa  138  3.0000000000000003e-31  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  30.62 
 
 
548 aa  137  3.0000000000000003e-31  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
640 aa  137  5e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
495 aa  137  5e-31  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  33.63 
 
 
546 aa  137  6.0000000000000005e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  28.53 
 
 
545 aa  137  6.0000000000000005e-31  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  29.57 
 
 
569 aa  136  7.000000000000001e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
706 aa  136  7.000000000000001e-31  Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
620 aa  137  7.000000000000001e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  30.83 
 
 
645 aa  136  8e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
620 aa  136  8e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  31.42 
 
 
640 aa  136  9e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
706 aa  136  9e-31  Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  28.29 
 
 
702 aa  136  9.999999999999999e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  31.29 
 
 
619 aa  136  9.999999999999999e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
638 aa  136  9.999999999999999e-31  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
495 aa  136  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.22 
 
 
632 aa  135  1.9999999999999998e-30  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  31.23 
 
 
640 aa  135  1.9999999999999998e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  29.74 
 
 
674 aa  135  1.9999999999999998e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  30.23 
 
 
549 aa  134  3e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  30.64 
 
 
545 aa  134  3e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  31.82 
 
 
658 aa  134  3e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0686  methyl-accepting chemotaxis sensory transducer  29.62 
 
 
551 aa  134  3e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  28.21 
 
 
547 aa  134  3e-30  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
495 aa  134  3e-30  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  32.52 
 
 
658 aa  134  3.9999999999999996e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  28.99 
 
 
693 aa  134  3.9999999999999996e-30  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  27 
 
 
696 aa  133  6.999999999999999e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  30.98 
 
 
633 aa  133  7.999999999999999e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
544 aa  132  1.0000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  29.1 
 
 
629 aa  133  1.0000000000000001e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  30.3 
 
 
549 aa  132  1.0000000000000001e-29  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  28.83 
 
 
632 aa  132  1.0000000000000001e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  31.8 
 
 
638 aa  132  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  30.25 
 
 
541 aa  132  2.0000000000000002e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  31.8 
 
 
638 aa  132  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  32.5 
 
 
638 aa  132  2.0000000000000002e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  33.45 
 
 
495 aa  131  2.0000000000000002e-29  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  31.27 
 
 
497 aa  132  2.0000000000000002e-29  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  26.49 
 
 
558 aa  131  3e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  28.09 
 
 
638 aa  131  3e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
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