Gene MADE_02969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02969 
Symbol 
ID6778918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3216596 
End bp3218185 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content45% 
IMG OID642756420 
ProductMethyl-accepting chemotaxis protein 
Protein accessionYP_002127259 
Protein GI196157770 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0476708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCCG TTCTAGCCAG CTTCTTTATC CTCGTATTGT TAAACGGTGC GTCTATTTTA 
AAATCGTTTT CACTGCTTAA TGCTTTTGAT GAACTAGAAA ATACTCTAGT ACAGTCAGAG
CGTGACGTAA ATACCACGCT AAGTACATTC AAAACCCAGG TTCAGGAATG GAAAAACGTA
CTGCTTCGCG GCCATAAAAA AGAGGATAGA GTAAAATATT GGGAGCGCTT CAAACAACGT
GAAGCGGATA TTACTCGCCA ATTCGACAAA ATGTTATCAA GTGCGGTTAT CAACGATAGC
GTTAAATCGA ACATTAGGCA GTTTCAACAG GCTCACGCCG TCATGGCTGA AAAATACCGC
GAAGGTTATA ACGCATTTGT CGATTCGGGG TTTGATCCAA AAGTAGGCGA TAGTTATGTT
CGTGGTATTG ATAGAGAGCC GGCGAAGCTT TTAAGCGGCA TTGCCTCAGA TATAGCGTCG
GATTCAGCCA GTGCAATTGC TGCACTTAAA GCGAATACGC GAAGTATGCT TTGGGTGATA
ATACTGGCAG CAATCGTATT GTCTGTATTG TCTGTAGTTT ATGTCATCGC CCGCTTGCGT
TCGCAGGTCA TTAAGCCTAC TAAAGAGGTT GCTGCATGTA TATCAAACCT AGCGAACAGT
CATTATGACT ATGCGCTTAC TTATACAAGC GATCATGAGC TTGGTATGCT GGCGAACTCT
GCACGGGCTT TACAGTACAA GCTAAAAGAG TCTGTTGCGC AGCTCCAGCA GGCAGAGAGA
GAAATTGATA AAGCGTTTGG TACCCTTGGG AATGTCAGTC AGTCGATTAT GGAAGGCGCT
AATGACCAAC GCGACGCCTC CCGCTCTTTA GATAGTAGTA CTGACAAGCT TAAAGAAATC
GTACAAAACT TGGTGGCGAT AACCGATCAG GTAGCGGTAG CAACCAATAA TTCTGAAAAA
AATGTGGCAA GCTGTTATGC CACATTCGAA AGCGCCAATG CCGGGTTTAA ACAATTAGCT
AAAACGGTGA CTGAATCAAG CGACATTGTT TCAGATTTAC AAACCCGCAG TACGAATATT
TTAAAAGTTG TGAATGTCAT TAATGAAATA GCGGACCAAA CCAACCTTTT AGCGCTTAAC
GCAGCAATTG AAGCCGCGAG AGCAGGGGAG CACGGGCGAG GTTTTGCGGT GGTCGCTGAT
GAGGTGCGTG CCCTCGCCGC TAAAACGCAG CAATCGACGA AAGAAATTAA CGATATATTA
AGCAGCTTTG AAGCCGAAGC AAAAGGGGCT GTTGCGGCTA TGTCATCAGG CAAGCAGTTA
TCTGATACTA ACGCAGCGGA GGCCGCTACA GCGCTTAAAA CGTTAAATAA CGTGGTAAAC
GATATTCAAG AGACTGCGAG TGTAGTGGTT GCACTTAACG AGGCTGCAGA TGAACAAGAG
GCCGTATTGC ATCAAGTTGA GATGATAATA AGCAATGTAG TTAACTCTTC AGAGAAGTAT
CACCAGCTCG CACAGCGCGA CGATATGTCT CACTCTATGA AAAGTATGTC AGAAAACGTA
GAAAAAGTGG TGAACAGTTT GACCCGCTAG
 
Protein sequence
MTPVLASFFI LVLLNGASIL KSFSLLNAFD ELENTLVQSE RDVNTTLSTF KTQVQEWKNV 
LLRGHKKEDR VKYWERFKQR EADITRQFDK MLSSAVINDS VKSNIRQFQQ AHAVMAEKYR
EGYNAFVDSG FDPKVGDSYV RGIDREPAKL LSGIASDIAS DSASAIAALK ANTRSMLWVI
ILAAIVLSVL SVVYVIARLR SQVIKPTKEV AACISNLANS HYDYALTYTS DHELGMLANS
ARALQYKLKE SVAQLQQAER EIDKAFGTLG NVSQSIMEGA NDQRDASRSL DSSTDKLKEI
VQNLVAITDQ VAVATNNSEK NVASCYATFE SANAGFKQLA KTVTESSDIV SDLQTRSTNI
LKVVNVINEI ADQTNLLALN AAIEAARAGE HGRGFAVVAD EVRALAAKTQ QSTKEINDIL
SSFEAEAKGA VAAMSSGKQL SDTNAAEAAT ALKTLNNVVN DIQETASVVV ALNEAADEQE
AVLHQVEMII SNVVNSSEKY HQLAQRDDMS HSMKSMSENV EKVVNSLTR