Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02969 |
Symbol | |
ID | 6778918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3216596 |
End bp | 3218185 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756420 |
Product | Methyl-accepting chemotaxis protein |
Protein accession | YP_002127259 |
Protein GI | 196157770 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0476708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCCG TTCTAGCCAG CTTCTTTATC CTCGTATTGT TAAACGGTGC GTCTATTTTA AAATCGTTTT CACTGCTTAA TGCTTTTGAT GAACTAGAAA ATACTCTAGT ACAGTCAGAG CGTGACGTAA ATACCACGCT AAGTACATTC AAAACCCAGG TTCAGGAATG GAAAAACGTA CTGCTTCGCG GCCATAAAAA AGAGGATAGA GTAAAATATT GGGAGCGCTT CAAACAACGT GAAGCGGATA TTACTCGCCA ATTCGACAAA ATGTTATCAA GTGCGGTTAT CAACGATAGC GTTAAATCGA ACATTAGGCA GTTTCAACAG GCTCACGCCG TCATGGCTGA AAAATACCGC GAAGGTTATA ACGCATTTGT CGATTCGGGG TTTGATCCAA AAGTAGGCGA TAGTTATGTT CGTGGTATTG ATAGAGAGCC GGCGAAGCTT TTAAGCGGCA TTGCCTCAGA TATAGCGTCG GATTCAGCCA GTGCAATTGC TGCACTTAAA GCGAATACGC GAAGTATGCT TTGGGTGATA ATACTGGCAG CAATCGTATT GTCTGTATTG TCTGTAGTTT ATGTCATCGC CCGCTTGCGT TCGCAGGTCA TTAAGCCTAC TAAAGAGGTT GCTGCATGTA TATCAAACCT AGCGAACAGT CATTATGACT ATGCGCTTAC TTATACAAGC GATCATGAGC TTGGTATGCT GGCGAACTCT GCACGGGCTT TACAGTACAA GCTAAAAGAG TCTGTTGCGC AGCTCCAGCA GGCAGAGAGA GAAATTGATA AAGCGTTTGG TACCCTTGGG AATGTCAGTC AGTCGATTAT GGAAGGCGCT AATGACCAAC GCGACGCCTC CCGCTCTTTA GATAGTAGTA CTGACAAGCT TAAAGAAATC GTACAAAACT TGGTGGCGAT AACCGATCAG GTAGCGGTAG CAACCAATAA TTCTGAAAAA AATGTGGCAA GCTGTTATGC CACATTCGAA AGCGCCAATG CCGGGTTTAA ACAATTAGCT AAAACGGTGA CTGAATCAAG CGACATTGTT TCAGATTTAC AAACCCGCAG TACGAATATT TTAAAAGTTG TGAATGTCAT TAATGAAATA GCGGACCAAA CCAACCTTTT AGCGCTTAAC GCAGCAATTG AAGCCGCGAG AGCAGGGGAG CACGGGCGAG GTTTTGCGGT GGTCGCTGAT GAGGTGCGTG CCCTCGCCGC TAAAACGCAG CAATCGACGA AAGAAATTAA CGATATATTA AGCAGCTTTG AAGCCGAAGC AAAAGGGGCT GTTGCGGCTA TGTCATCAGG CAAGCAGTTA TCTGATACTA ACGCAGCGGA GGCCGCTACA GCGCTTAAAA CGTTAAATAA CGTGGTAAAC GATATTCAAG AGACTGCGAG TGTAGTGGTT GCACTTAACG AGGCTGCAGA TGAACAAGAG GCCGTATTGC ATCAAGTTGA GATGATAATA AGCAATGTAG TTAACTCTTC AGAGAAGTAT CACCAGCTCG CACAGCGCGA CGATATGTCT CACTCTATGA AAAGTATGTC AGAAAACGTA GAAAAAGTGG TGAACAGTTT GACCCGCTAG
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Protein sequence | MTPVLASFFI LVLLNGASIL KSFSLLNAFD ELENTLVQSE RDVNTTLSTF KTQVQEWKNV LLRGHKKEDR VKYWERFKQR EADITRQFDK MLSSAVINDS VKSNIRQFQQ AHAVMAEKYR EGYNAFVDSG FDPKVGDSYV RGIDREPAKL LSGIASDIAS DSASAIAALK ANTRSMLWVI ILAAIVLSVL SVVYVIARLR SQVIKPTKEV AACISNLANS HYDYALTYTS DHELGMLANS ARALQYKLKE SVAQLQQAER EIDKAFGTLG NVSQSIMEGA NDQRDASRSL DSSTDKLKEI VQNLVAITDQ VAVATNNSEK NVASCYATFE SANAGFKQLA KTVTESSDIV SDLQTRSTNI LKVVNVINEI ADQTNLLALN AAIEAARAGE HGRGFAVVAD EVRALAAKTQ QSTKEINDIL SSFEAEAKGA VAAMSSGKQL SDTNAAEAAT ALKTLNNVVN DIQETASVVV ALNEAADEQE AVLHQVEMII SNVVNSSEKY HQLAQRDDMS HSMKSMSENV EKVVNSLTR
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