| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4317 |
|---|
| Symbol | |
|---|
| ID | 3714133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4872197 |
|---|
| End bp | 4873819 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_350045 |
|---|
| Protein GI | 77460538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.153995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAA AATCCCTGAG AGCGCAAATT CTCGCCCTGC TGAGCGGCAG CCTGCTGGCG
ATGCTGTTGA TCGCGCTGGC CTGCTTTCAT TTCCTGTCCA ACGGCGTGCA GAACTACAGC
CAATTGATTG CAGGTCCGTT GCACACCTCG CAACTGATCG ATGAAGCCAA CCTGCAATTC
AAGGTGCAGG TTCAGGAGTG GAAAAACGTT CTGCTGCGCG GCAAGCAACC GGCGGATCTG
GCCAAGTACT GGGGCCAGTT CGAAGACCGT CAGCGCGATG TGCAGAACAT CCTCAGTGAG
CTGGCCAACC AGAAAGGCCT CGACCCTGCG TTGAAAACTC GTATCGAACG CCTGCGCGAA
GAACATCGTC TGCTCGGCGC CGCGTACCAG AAGGGCCGTG ATGCCTACGT CGCCACCGGT
GCCGATCCGA CTGCGGGCGA TGCCGCCGTC AAAGGCGTCG ACCGTGCCGC CAGCGACCAG
ATGAGCGAAC TGGTCGCCGA GCTGCGCAAG CAGGGCACCG AGCAATCGGC GCAGATCAGC
GCCAGTGCCG ATCGCACCGT GTGGCTGGGT CTGCTGGTGA TGCTCGCGTC CGGTCTGCTG
ATCGGTTTGC TGAGCCTGTG GCTGGTCAAC CGCAACCTGG TCGAGCCGAT CAGCAAACTG
ATCGACTACG TCACTCAACT GAGCAAGGGC CGTCTGGTCG AGCGCGTGGC CAGTGACCGT
CAGGACGAGC TGGGCAACCT GGCCGCCGCG GCCAACACCC TGCGCGATTT CCTCGCCGAA
ACCTTCAATC ACCTGCAACG CAGCGCCAAG GATCTGGACA GCGCCAGCGG CGAGTTGAAC
GCCATCGCCA CGCTGATGGC CGGCGGCACC AACGAGCAGT TCAACCGCAC CGATCAGGTG
GCCACGGCGA TGAACGAAAT GTCCGCCACT GCCCAGGAAG TCGCCCGTCA TGCGGCCGAC
GCTGCGCGTG CGGCCGACGA TGCTGACCAG TCCGCGCAGC AGGGCGAGAA GGTCATGCAG
AGCACCATCC ACAGCATCAC CCAGATGCGC GGCGAAATCG CCAACACCGC CACGGTCATC
CGTCGTCTGG AAGCCGACAG CGGTCGCATC GGCAAAGTGC TGGAAGTGAT TCGCGGGATC
GCCGAGCAGA CCAACCTGCT GGCGCTCAAC GCCGCCATCG AAGCGGCCCG CGCGGGTGAG
GCCGGGCGTG GTTTTGCAGT GGTCGCCGAT GAGGTGCGCA ACCTCGCGCA GCGTACGGCG
GAGTCGATCA TCGAGATCAA CCAGATCATC CACAGCGTGC AGACCGGTGC GGTGGACGCG
GCCCAGGCCA TCGACAGCGG CCAGACCCGC AGCGATGAAA GCGTCGAGCA AGTGACCCAG
GCCGGCGCCA TGCTTGAGCG CATCACCCAC GCGGTGGAAG CGATTCGCGA CATGAACCGT
CAGATCGCCA CGGCGGCCGA AGAGCAGACT TCGGTGGCCG AAGACATCTC GCGCAACCTG
ACCGAGATCA CCTCGATCGC CAGCACCAAC CTCGACAACG TGCAGCGCAC CGAGAGCGCC
AGCCAGAACC TGCACGGCCT GTCCGGCCAA CTGAACGACG TCACCGCTCG CCTGAGCGTC
TGA
|
|---|
| Protein sequence | MLQKSLRAQI LALLSGSLLA MLLIALACFH FLSNGVQNYS QLIAGPLHTS QLIDEANLQF
KVQVQEWKNV LLRGKQPADL AKYWGQFEDR QRDVQNILSE LANQKGLDPA LKTRIERLRE
EHRLLGAAYQ KGRDAYVATG ADPTAGDAAV KGVDRAASDQ MSELVAELRK QGTEQSAQIS
ASADRTVWLG LLVMLASGLL IGLLSLWLVN RNLVEPISKL IDYVTQLSKG RLVERVASDR
QDELGNLAAA ANTLRDFLAE TFNHLQRSAK DLDSASGELN AIATLMAGGT NEQFNRTDQV
ATAMNEMSAT AQEVARHAAD AARAADDADQ SAQQGEKVMQ STIHSITQMR GEIANTATVI
RRLEADSGRI GKVLEVIRGI AEQTNLLALN AAIEAARAGE AGRGFAVVAD EVRNLAQRTA
ESIIEINQII HSVQTGAVDA AQAIDSGQTR SDESVEQVTQ AGAMLERITH AVEAIRDMNR
QIATAAEEQT SVAEDISRNL TEITSIASTN LDNVQRTESA SQNLHGLSGQ LNDVTARLSV
|
|---|
| |