| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1108 |
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| Symbol | |
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| ID | 3968295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1432992 |
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| End bp | 1434611 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920179 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_526582 |
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| Protein GI | 90020755 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAATA TGAGTATACG GCGCCAAATT CTGGCGCTGG GTATAGGGAG CATGCTGGCC
GTAGGCTTGG TGGCAATGGT TGCGTTTATT ATGCTCAACC GCCAGGTCGA ACACTACCAG
CACCTTTTGG ATGAGCAATA CGCTGTAGCG CTGGAGGCTG ATAAAACAGT CTTGGCGTTC
AAGCGGCAGG TGCAAGAGTG GAAAAACGTG TTGTTACGTG GCCATGACGC ATCCAATTTA
AATAAATACT GGGGGCGCTT TGAGGAGCAT CAGCGCGATA TTCAATCATC TGCAATCGCT
ATAGCCAACA GTGATGTGCC GCCGCAAGCT AGAGCCAAAA TACAAGCATT TCAGGCTGAG
CACAAAGCTA TTTTCTCCAA ATACCAAGCG GGCAAGCAGG CATTTATCTC TTCTGGGTAT
GATCATAAGG CCGGTGACCG TGCAGTAAGT GGAATAGATC GGCAGCCGAC GAAAGACCTC
GAAGAAGCCT CAGAAATAAT TACCGCTGCG GCAAACGATA AAGCCAAACA GCTAGCGGCA
ACCACCAAAA AAGTGTTTTT TACTGCTGGG GCAGCGTTAG TTTCAATGAT GATCTTGGTT
GCCTTGGCAG CAGCCTATAT TGGCAGTAAT AAAATAGCTA AGCCAATTTC CGAGATGGTC
AGGCACTTAG ATTTACTTGT GCGAGGCAAT TTTTCTTCGC GGGTAGATTA TTGGGGCCAA
GATGAAATGG GCCGAATGGC AGATGGTATT CGCACTTTGC AAGCAAAGCT GCAAGGCTCT
ACGGATAAGC TAAGTGCGGT AACCAACTCA TTACATGCAG CCAGTGAATC CATGGAGGGG
GTGGCAAAAA GTATTCAAAC GGGCACGACC AGCCAATACT CACGCACCGA GCATTCAGCC
TCCGCAATGA CTGAGCTTTC CTGCACTGCG AAGGAGGTAG CCAAACACGC TTCTGATGCG
AAACGCCTCT CCGATCAAGC CGATGAGGCC GCGGTGGACG GTGAGAAAGT GATGAATGAA
GCCATCTCCA CTATGCACCA AATGAAAGAC CAAATTGCTA ATACTGCCGG CGTAATAATG
AGCTTGGAAG AAGATACCAG CGAAGTAGGG AAAGTGCTGG ATGTTATTCG CGGCATTGCA
GAGCAAACTA ACCTACTGGC TTTAAATGCG GCGATTGAAG CTGCACGCGC GGGCGAGCAG
GGGCGCGGTT TTGCGGTGGT TGCTGATGAA GTGCGCACTC TCGCGCAGCG CACGCAAGAG
TCCACAGCGG AAATTCATCA AATGATAGTA AACGTGCAGT CGGGTGCTCA CGGTGCTGTA
TCGGCCATTG AGGCGGGTGG CGCACAATCG GAAGATACTA TGGAAAAACT GACGAAAGCG
GGCGCGAAAT TACAAGACAT TCGCCACTGT ATCGATCAGA TGACGGGGGT AAATCAGCTT
ATTGCTTCCG CTGCGCAGGA GCAAGCGCAT GTGTCGGAGG ATATTACGCA GGCGATCACA
GACATTGCCA ATATCGCCAA TGATTCTGCC AAGCAAGCCG GCGAGGTTTC TGCTATGACT
GCCACTATGC GCAAATCATG TGACGAGCTT CAGTTAGTCG TGGCAGAACT TAAATCTTAA
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| Protein sequence | MGNMSIRRQI LALGIGSMLA VGLVAMVAFI MLNRQVEHYQ HLLDEQYAVA LEADKTVLAF
KRQVQEWKNV LLRGHDASNL NKYWGRFEEH QRDIQSSAIA IANSDVPPQA RAKIQAFQAE
HKAIFSKYQA GKQAFISSGY DHKAGDRAVS GIDRQPTKDL EEASEIITAA ANDKAKQLAA
TTKKVFFTAG AALVSMMILV ALAAAYIGSN KIAKPISEMV RHLDLLVRGN FSSRVDYWGQ
DEMGRMADGI RTLQAKLQGS TDKLSAVTNS LHAASESMEG VAKSIQTGTT SQYSRTEHSA
SAMTELSCTA KEVAKHASDA KRLSDQADEA AVDGEKVMNE AISTMHQMKD QIANTAGVIM
SLEEDTSEVG KVLDVIRGIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRTLAQRTQE
STAEIHQMIV NVQSGAHGAV SAIEAGGAQS EDTMEKLTKA GAKLQDIRHC IDQMTGVNQL
IASAAQEQAH VSEDITQAIT DIANIANDSA KQAGEVSAMT ATMRKSCDEL QLVVAELKS
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