More than 300 homologs were found in PanDaTox collection
for query gene PP_2120 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2120  methyl-accepting chemotaxis sensory transducer  100 
 
 
555 aa  1089    Pseudomonas putida KT2440  Bacteria  normal  normal  0.236845 
 
 
-
 
NC_009512  Pput_3621  methyl-accepting chemotaxis sensory transducer  98.56 
 
 
555 aa  1074    Pseudomonas putida F1  Bacteria  normal  normal  0.30858 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  64.4 
 
 
559 aa  637    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_010501  PputW619_1637  methyl-accepting chemotaxis sensory transducer  92.75 
 
 
538 aa  921    Pseudomonas putida W619  Bacteria  normal  0.662156  normal 
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  70.5 
 
 
540 aa  647    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_010322  PputGB1_1660  methyl-accepting chemotaxis sensory transducer  97.4 
 
 
538 aa  958    Pseudomonas putida GB-1  Bacteria  normal  normal  0.170942 
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  66.48 
 
 
540 aa  632  1e-180  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  63.41 
 
 
575 aa  613  9.999999999999999e-175  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_009656  PSPA7_2672  putative chemotaxis transducer  64.87 
 
 
538 aa  606  9.999999999999999e-173  Pseudomonas aeruginosa PA7  Bacteria  normal  0.119833  n/a   
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  42.52 
 
 
539 aa  380  1e-104  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
572 aa  338  9.999999999999999e-92  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  39.73 
 
 
525 aa  338  1.9999999999999998e-91  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  45.48 
 
 
713 aa  248  3e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.86 
 
 
523 aa  246  6e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  45.48 
 
 
712 aa  246  9e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.09 
 
 
640 aa  244  3e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  45.48 
 
 
712 aa  244  3.9999999999999997e-63  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
716 aa  243  9e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
511 aa  240  4e-62  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  47.02 
 
 
714 aa  239  6.999999999999999e-62  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  43.39 
 
 
650 aa  239  6.999999999999999e-62  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
714 aa  239  9e-62  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  37.73 
 
 
552 aa  237  5.0000000000000005e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  44.22 
 
 
564 aa  236  6e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  32.61 
 
 
541 aa  236  1.0000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  37.5 
 
 
640 aa  234  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
639 aa  234  3e-60  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  32.25 
 
 
666 aa  234  3e-60  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
647 aa  233  5e-60  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.95 
 
 
540 aa  231  2e-59  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  40.94 
 
 
739 aa  230  5e-59  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.94 
 
 
647 aa  230  5e-59  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  40.47 
 
 
629 aa  230  6e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  32.58 
 
 
542 aa  229  7e-59  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  32.58 
 
 
563 aa  229  8e-59  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  32.37 
 
 
542 aa  229  1e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  39.66 
 
 
633 aa  229  1e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  32.37 
 
 
542 aa  229  1e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
541 aa  229  1e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  32.37 
 
 
542 aa  229  1e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5361  methyl-accepting chemotaxis sensory transducer  33.67 
 
 
508 aa  228  2e-58  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
714 aa  228  2e-58  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.08 
 
 
619 aa  227  3e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  32.72 
 
 
661 aa  227  4e-58  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
634 aa  226  1e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
688 aa  226  1e-57  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  32.72 
 
 
661 aa  225  1e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.41 
 
 
541 aa  225  1e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
714 aa  225  1e-57  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.69 
 
 
638 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  45.57 
 
 
714 aa  224  2e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  41.79 
 
 
647 aa  224  3e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  47.75 
 
 
688 aa  224  3e-57  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
634 aa  224  3e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  37.29 
 
 
640 aa  224  3e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.5 
 
 
634 aa  224  4e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
541 aa  224  4e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  39.66 
 
 
641 aa  223  6e-57  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.06 
 
 
638 aa  223  6e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
544 aa  223  6e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  32.18 
 
 
541 aa  223  6e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  32.97 
 
 
541 aa  223  6e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  41.69 
 
 
645 aa  223  7e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
638 aa  223  7e-57  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
656 aa  222  9.999999999999999e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  43.41 
 
 
647 aa  222  9.999999999999999e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  33.09 
 
 
543 aa  223  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
640 aa  222  9.999999999999999e-57  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
620 aa  222  1.9999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
674 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  32.97 
 
 
541 aa  221  1.9999999999999999e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
552 aa  221  3e-56  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
620 aa  221  3e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
552 aa  221  3e-56  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
540 aa  221  3e-56  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  38 
 
 
773 aa  221  3.9999999999999997e-56  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
637 aa  219  8.999999999999998e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
688 aa  219  1e-55  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  39.71 
 
 
541 aa  219  1e-55  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
411 aa  218  2e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  32.19 
 
 
541 aa  218  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  40.4 
 
 
546 aa  218  2e-55  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  43.25 
 
 
624 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  47.02 
 
 
688 aa  218  2.9999999999999998e-55  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  39.4 
 
 
715 aa  218  2.9999999999999998e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  40 
 
 
638 aa  217  4e-55  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  40.92 
 
 
640 aa  217  4e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
638 aa  217  5e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  40 
 
 
638 aa  216  5.9999999999999996e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.4 
 
 
634 aa  216  5.9999999999999996e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  46.31 
 
 
636 aa  216  8e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  42.17 
 
 
647 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.43 
 
 
620 aa  214  1.9999999999999998e-54  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
662 aa  214  2.9999999999999995e-54  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  40.46 
 
 
640 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  42.34 
 
 
712 aa  214  2.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.35 
 
 
637 aa  214  2.9999999999999995e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  43.6 
 
 
714 aa  214  3.9999999999999995e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  39.46 
 
 
620 aa  214  3.9999999999999995e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.29 
 
 
548 aa  213  7e-54  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
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