More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_2526 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2120  methyl-accepting chemotaxis sensory transducer  63.86 
 
 
555 aa  638    Pseudomonas putida KT2440  Bacteria  normal  normal  0.236845 
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  67.9 
 
 
540 aa  654    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_009512  Pput_3621  methyl-accepting chemotaxis sensory transducer  64.32 
 
 
555 aa  648    Pseudomonas putida F1  Bacteria  normal  normal  0.30858 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  100 
 
 
559 aa  1112    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  70.63 
 
 
540 aa  659    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_010322  PputGB1_1660  methyl-accepting chemotaxis sensory transducer  65.86 
 
 
538 aa  644    Pseudomonas putida GB-1  Bacteria  normal  normal  0.170942 
 
 
-
 
NC_010501  PputW619_1637  methyl-accepting chemotaxis sensory transducer  64.94 
 
 
538 aa  629  1e-179  Pseudomonas putida W619  Bacteria  normal  0.662156  normal 
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  63.2 
 
 
575 aa  623  1e-177  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_009656  PSPA7_2672  putative chemotaxis transducer  64.75 
 
 
538 aa  614  9.999999999999999e-175  Pseudomonas aeruginosa PA7  Bacteria  normal  0.119833  n/a   
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  41.95 
 
 
539 aa  388  1e-106  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
525 aa  338  1.9999999999999998e-91  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  37.55 
 
 
572 aa  314  2.9999999999999996e-84  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  40.52 
 
 
541 aa  256  6e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  40.72 
 
 
640 aa  254  4.0000000000000004e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.35 
 
 
523 aa  247  4.9999999999999997e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  43.79 
 
 
564 aa  245  9.999999999999999e-64  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  41.53 
 
 
633 aa  244  3e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  42.24 
 
 
541 aa  244  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  43.47 
 
 
712 aa  241  2e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  43.18 
 
 
712 aa  240  4e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  42.64 
 
 
541 aa  240  4e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  48.37 
 
 
637 aa  238  2e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  40.75 
 
 
619 aa  237  4e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
639 aa  236  9e-61  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  39.55 
 
 
624 aa  234  2.0000000000000002e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  39.13 
 
 
629 aa  234  4.0000000000000004e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
540 aa  233  8.000000000000001e-60  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  40.95 
 
 
640 aa  233  9e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  42.73 
 
 
713 aa  233  9e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.5 
 
 
541 aa  233  9e-60  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
647 aa  232  1e-59  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
647 aa  231  2e-59  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  42.11 
 
 
638 aa  231  2e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.52 
 
 
638 aa  230  4e-59  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  41.94 
 
 
647 aa  230  4e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
739 aa  231  4e-59  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
541 aa  229  1e-58  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
541 aa  228  2e-58  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
716 aa  228  2e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
638 aa  228  2e-58  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  42.09 
 
 
640 aa  228  3e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
636 aa  227  4e-58  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
572 aa  227  6e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
638 aa  226  1e-57  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
411 aa  225  1e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  41.53 
 
 
640 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
541 aa  225  1e-57  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
650 aa  226  1e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
638 aa  225  2e-57  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
555 aa  224  3e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
634 aa  224  4.9999999999999996e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
638 aa  224  4.9999999999999996e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  35.34 
 
 
541 aa  223  9e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
674 aa  222  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
620 aa  222  9.999999999999999e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
620 aa  223  9.999999999999999e-57  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
620 aa  222  9.999999999999999e-57  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
634 aa  221  1.9999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  46.77 
 
 
714 aa  221  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  41.13 
 
 
620 aa  221  1.9999999999999999e-56  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  46.55 
 
 
714 aa  221  3e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
637 aa  220  5e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  41.45 
 
 
541 aa  220  5e-56  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  42.9 
 
 
647 aa  220  6e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
640 aa  220  6e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.55 
 
 
634 aa  219  8.999999999999998e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  36.57 
 
 
541 aa  219  8.999999999999998e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
620 aa  219  1e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  46.25 
 
 
714 aa  219  1e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  39.33 
 
 
541 aa  219  1e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  36.17 
 
 
546 aa  218  2e-55  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
568 aa  218  2e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  36.89 
 
 
676 aa  218  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  45.99 
 
 
688 aa  218  2e-55  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
620 aa  218  2.9999999999999998e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_007005  Psyr_1539  histidine kinase, HAMP region: chemotaxis sensory transducer  41.25 
 
 
626 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.206608  normal  0.0710897 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
544 aa  218  2.9999999999999998e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  45.7 
 
 
688 aa  217  5e-55  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
541 aa  217  5e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.44 
 
 
634 aa  217  5.9999999999999996e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
543 aa  216  5.9999999999999996e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  38.15 
 
 
640 aa  217  5.9999999999999996e-55  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_007492  Pfl01_4192  chemotaxis sensory transducer  41.98 
 
 
654 aa  216  5.9999999999999996e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  45.1 
 
 
688 aa  215  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  46.06 
 
 
714 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
541 aa  216  9.999999999999999e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  41.62 
 
 
712 aa  215  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  45.18 
 
 
715 aa  216  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  46.06 
 
 
714 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  41.91 
 
 
662 aa  215  1.9999999999999998e-54  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  39.94 
 
 
541 aa  215  1.9999999999999998e-54  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  38.14 
 
 
641 aa  215  1.9999999999999998e-54  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
541 aa  215  1.9999999999999998e-54  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
547 aa  215  1.9999999999999998e-54  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
773 aa  214  2.9999999999999995e-54  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  41.91 
 
 
645 aa  214  2.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  43.58 
 
 
552 aa  214  2.9999999999999995e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  35.29 
 
 
620 aa  214  2.9999999999999995e-54  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
656 aa  214  2.9999999999999995e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  36.29 
 
 
425 aa  214  3.9999999999999995e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
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