More than 300 homologs were found in PanDaTox collection
for query gene Psyr_3406 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  81.77 
 
 
521 aa  882    Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  82.15 
 
 
521 aa  891    Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  78.12 
 
 
521 aa  844    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  77.93 
 
 
521 aa  842    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  76.78 
 
 
521 aa  825    Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  95.59 
 
 
521 aa  1025    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  82.15 
 
 
521 aa  889    Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_007005  Psyr_3406  PAS  100 
 
 
521 aa  1064    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  82.15 
 
 
521 aa  892    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  84.26 
 
 
521 aa  905    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
521 aa  488  1e-136  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
534 aa  483  1e-135  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3735  PAS  50.77 
 
 
521 aa  484  1e-135  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  50.09 
 
 
521 aa  481  1e-134  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  49.81 
 
 
521 aa  481  1e-134  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.09 
 
 
521 aa  479  1e-134  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.81 
 
 
521 aa  479  1e-134  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.52 
 
 
523 aa  444  1e-123  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
521 aa  437  1e-121  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
522 aa  435  1e-121  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  47.43 
 
 
521 aa  432  1e-120  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.86 
 
 
521 aa  434  1e-120  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  44.81 
 
 
524 aa  420  1e-116  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  43.4 
 
 
527 aa  405  1.0000000000000001e-112  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
515 aa  404  1e-111  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.8 
 
 
527 aa  399  9.999999999999999e-111  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  44.02 
 
 
529 aa  389  1e-107  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.99 
 
 
526 aa  385  1e-105  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.8 
 
 
521 aa  380  1e-104  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.6 
 
 
524 aa  377  1e-103  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.49 
 
 
524 aa  377  1e-103  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.49 
 
 
524 aa  377  1e-103  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  41.22 
 
 
524 aa  369  1e-101  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  41.22 
 
 
524 aa  369  1e-101  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
524 aa  371  1e-101  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.22 
 
 
524 aa  369  1e-101  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  40.58 
 
 
524 aa  368  1e-100  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
524 aa  368  1e-100  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
520 aa  363  6e-99  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  45.97 
 
 
419 aa  353  4e-96  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.4 
 
 
524 aa  343  4e-93  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  37.62 
 
 
518 aa  340  2.9999999999999998e-92  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
532 aa  330  3e-89  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
531 aa  330  6e-89  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  38.8 
 
 
532 aa  325  1e-87  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.9 
 
 
524 aa  320  3.9999999999999996e-86  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  34.29 
 
 
516 aa  314  2.9999999999999996e-84  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  37.73 
 
 
511 aa  312  1e-83  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.28 
 
 
516 aa  305  1.0000000000000001e-81  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.84 
 
 
514 aa  301  2e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  37.81 
 
 
523 aa  299  7e-80  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
522 aa  297  3e-79  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.65 
 
 
522 aa  296  7e-79  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  37.24 
 
 
533 aa  295  1e-78  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.3 
 
 
522 aa  295  2e-78  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.3 
 
 
522 aa  294  2e-78  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.92 
 
 
514 aa  294  3e-78  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  37.24 
 
 
522 aa  294  3e-78  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  37.37 
 
 
520 aa  293  7e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  36.64 
 
 
522 aa  292  8e-78  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.89 
 
 
522 aa  291  2e-77  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
532 aa  291  2e-77  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.02 
 
 
522 aa  290  5.0000000000000004e-77  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
522 aa  290  5.0000000000000004e-77  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
522 aa  290  6e-77  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.6 
 
 
524 aa  289  9e-77  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
522 aa  288  2e-76  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  35.88 
 
 
513 aa  286  5.999999999999999e-76  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
538 aa  285  1.0000000000000001e-75  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  35.63 
 
 
517 aa  284  2.0000000000000002e-75  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.22 
 
 
522 aa  283  6.000000000000001e-75  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.79 
 
 
522 aa  283  7.000000000000001e-75  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.27 
 
 
511 aa  281  1e-74  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.83 
 
 
522 aa  281  2e-74  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  34.43 
 
 
557 aa  280  3e-74  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  35.57 
 
 
522 aa  280  4e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  34.22 
 
 
518 aa  279  7e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.52 
 
 
519 aa  276  8e-73  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.59 
 
 
517 aa  269  8.999999999999999e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  34.67 
 
 
544 aa  268  2e-70  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
519 aa  267  2.9999999999999995e-70  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  34.32 
 
 
514 aa  267  4e-70  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.11 
 
 
598 aa  266  7e-70  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.08 
 
 
551 aa  264  3e-69  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  33.78 
 
 
544 aa  258  1e-67  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.97 
 
 
519 aa  256  6e-67  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.96 
 
 
575 aa  256  7e-67  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_010086  Bmul_3362  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.25 
 
 
514 aa  255  1.0000000000000001e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.234118 
 
 
-
 
NC_007511  Bcep18194_B0267  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
514 aa  254  2.0000000000000002e-66  Burkholderia sp. 383  Bacteria  normal  normal  0.715012 
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  34.95 
 
 
520 aa  254  3e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.01 
 
 
514 aa  253  5.000000000000001e-66  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  34.14 
 
 
583 aa  253  6e-66  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.32 
 
 
552 aa  252  9.000000000000001e-66  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_008391  Bamb_4714  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.27 
 
 
535 aa  252  9.000000000000001e-66  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.26 
 
 
550 aa  252  1e-65  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5243  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.39 
 
 
514 aa  252  1e-65  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0641076  normal 
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.33 
 
 
514 aa  252  1e-65  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  34.26 
 
 
580 aa  251  2e-65  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  34.26 
 
 
580 aa  251  2e-65  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  34.26 
 
 
580 aa  251  2e-65  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
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