| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0580 |
|---|
| Symbol | |
|---|
| ID | 8806325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 612945 |
|---|
| End bp | 614510 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_003459831 |
|---|
| Protein GI | 289207765 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0413099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGA ACCTTCCTGT TACGCAGACG GAGTATTCCC TGGAGGCCCA CGGAGACCTC
ATCTCGGCCA CCGACGAGAA AGGGCGCATC CGGTATGCCA ACGACGACTT CGTCCGGGTC
AGCGGTTTCG ACTGCGATGA GCTGGAAGGG ACGGCCCACA ACATCGTGCG CCATCCGGAC
ATGCCGGAAG CCGCCTACGC GAACATGTGG GACACCCTGA AGGCCGACCG GGCCTGGATG
GGTATCGTCA AGAACCGGCG CAAGAATGGC GACCACTACT GGGTGGATGC CTTCGTGACC
CCCGCCTACG AGGACGGCCG CAAGACCGGC TACGAGTCGG TGCGCGCGAT CCCCGAGCAC
GAGCATGTCG CCCGTGCGGA GAAGGTCTAT GCCGCGATCA ACCGGGGTCG CAGCTTTGCT
CGGCGCTGGT ATCACGGCCT CACCTGCCGC CTCGCGGGGA CGTGGCTTGT GGGTGTCCTG
CTGGCGCTGG GGGTAGTGTT TCTGGTGTCT TCGCCGCTGG TCCAGGCGGG GCTTTTGCTG
CTGATTTTCG CAGCTGGTGG AATTGCGTCT CTGGCGCTGA CCTCCGGCAT CCGGAAGGCC
GTGAATCGGG CCCGCGAGCA GTTCGACAAC CCGGTGATGG AGGCGATCTA CACAGGACGT
CGTGACGACA GCGCCTCGCT GGAACTGGTC CAGCACTTCA ACGAGGCGAA GCTGCGCACG
GTGCTCGGCC GCATCGAGGA CAAGGCAGAT GCCGTGGCCG GTGACGCACA GACAATGGCG
AGCAGTGTCG AGCAGACGGC CTTGGGCGTG GAACGCCAGC AAAACGAGAT CGATCAGGTC
GCCACGGCGA TGAACGAGAT GACCTCGACC ATCCAGGAGA TGGCGAGCAA TTCGTCGCGC
GCGGCCGAGG CCGCCAACAA CGCCGAGAAC GAGACCGGTG CTGGCCAGGA GGTGGTGAAC
GACACGGTGT CCGTGATCAA CCGCATGGCG GCCGAGGTCG AGTCCACCGC CGAGAAGCTG
GGCAAGCTGG AGGCGAGCAC CGAGGAGATC GACAAGATCC TGGGTGTGAT CCGCGAGATT
GCCGAACAGA CCAATCTGCT GGCGCTGAAC GCCGCGATCG AGGCGGCCCG CGCGGGCGAA
CACGGCCGCG GCTTTGCGGT GGTGGCCGAC GAGGTGCGCT CGCTGTCGCA GCGTACGGAC
GAATCCACCG TGACCATCCG CAATATGATC GAGAGCCTGC AAAACGGTGC GCGCGAGGCG
ATGTCCGCGA TGCGCGCCAG TCAGGAGCAG GCCGCCGATG GCGTGGAAAA GGCCCGGGCG
GCAGGCGATT CGCTGTCCAC CATCCGTCAG GCCGTCGCCC AGATCACCGA GATGAACACC
CAGATCGCCA CGGCGGTGGA GGAACAAAGC GCGGTCTCCG AGGAGATCAA CCGCAACGTG
ACGTCCATCC GCGATGTCGC CAGTGAAACC GGTTCGGTCT CGGTGCACGC CCGTGACGCC
AGCGCGCGCA TGCAGACCGA GGCCGCGGAA CTCAAGGCAT TGATCCAGCG TTTCGAGCAG
CGGTAG
|
|---|
| Protein sequence | MRKNLPVTQT EYSLEAHGDL ISATDEKGRI RYANDDFVRV SGFDCDELEG TAHNIVRHPD
MPEAAYANMW DTLKADRAWM GIVKNRRKNG DHYWVDAFVT PAYEDGRKTG YESVRAIPEH
EHVARAEKVY AAINRGRSFA RRWYHGLTCR LAGTWLVGVL LALGVVFLVS SPLVQAGLLL
LIFAAGGIAS LALTSGIRKA VNRAREQFDN PVMEAIYTGR RDDSASLELV QHFNEAKLRT
VLGRIEDKAD AVAGDAQTMA SSVEQTALGV ERQQNEIDQV ATAMNEMTST IQEMASNSSR
AAEAANNAEN ETGAGQEVVN DTVSVINRMA AEVESTAEKL GKLEASTEEI DKILGVIREI
AEQTNLLALN AAIEAARAGE HGRGFAVVAD EVRSLSQRTD ESTVTIRNMI ESLQNGAREA
MSAMRASQEQ AADGVEKARA AGDSLSTIRQ AVAQITEMNT QIATAVEEQS AVSEEINRNV
TSIRDVASET GSVSVHARDA SARMQTEAAE LKALIQRFEQ R
|
|---|
| |