Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5286 |
Symbol | |
ID | 5750898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5854425 |
End bp | 5855984 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641300411 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_001566300 |
Protein GI | 160900718 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.982796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTGA ATTTGCCCGT CAGCCAGCTC AACTACGACT TTCCGGGCGA TGAGCTGCTG GTATCCGTCA CCAACACCAA GGGCGAGATC ACCCATTGCA ACCCGGCCTT CGTGCGGGTC AGCGGCTATT CCTACGAGGA ACTGATCGAG CAGCCGCACA ACCTGATCCG CCACCCGGAC ATGCCGGCCG CCGCCTTCAA GGACATGTGG CGCACCATCG CCCACGGCTA CCCGTGGACT GCCCTGGTCA AGAACCGGCG CAAGAACGGC GACCACTACT GGGTGCGCGC CAACGTCACG CCCATCATGG AAGGCGGCCG TCCGCGCGGC TACCTTTCGG TGCGCACCAA GCCCCGGCCG GACGAGATCG AAGCCGCCGA AGCCCTCTAT GCCCGCATGC GCGCCGAAGC CGATGCCGGC CAGGAAACCC TGCGACTGCG CGGCGGCGAA CTGCGCCGCC TGGGCCTGGC AGGCCTGTGG GACCGCCGCA GCGACCTGGG CCTGACAGCC CGCATGGCGC TGATGCTGGG CGGCGTGGGC CTGGCCGCCA TGCTGCCCGA CCTGCTGGGC TGGCAGGGCG CCGCAGCTTG GGGCACGCGC CTGGCCGCCT TGCTGGCGGG GGGCAGCTTT GTGCTGTGGC GCTTCCAGCA GCGCTGCGTG GCGGGCCTGG AACAGGCCAG CGGCTTTGCC GCCGACATTG CCAGCTGCCA GTTGGGCACC AACATGCAGC ACGACTACAG CGGCCCCATG GGCGCCCTGA TGCAGCGGCT GCAGCAAATC CAGATCAACC TGCGCGCCGT GGTCGGCGAC GTGCGCACCG AAATGCGCGG CTTTGCCACC ACCGCCCACG AGATCGCCCA GGGCAGCTTC GACCTCGCGC AGCGCACAGA ATCCCAGGCC ACCAGCCTTC AGCAGACGGC GGCCTCGATG GAAGAGATAT CAGGCACCGT GGCGCAGACC GCCGACACGG CCCAGCTCAT GGCCCATGAA AGCGACCAGA GCCGCCAGGT TGCCGGCAAG AGCGGCGCCG CCATCCAGGA AGTGGGCGCT GCCATGGAGC ACATCCGTGG CTCCTCGCGC CGCATGGGCG AGATCATCGG CGTCATCGAA AGCATTGCCT TCCAGACCAA CCTGCTGGCC CTGAATGCCG CCGTAGAAGC CGCACGCGCA GGTGAGCAGG GCCGCGGCTT TGCCGTCGTG GCCGGCGAAG TGCGCGCCCT GGCCCAGCGC AGCGCCTCGG CCGCCAAGGA AATCAGCGGC CTCATCAACC GCACCGTGGA CGGCATCAAC GACGGCAACG CCCGCATGGA CGCCGCAGGC CGCACCATCG ACGGCATGGT CGACGCCGTG GGCCGCGTCA GCGACCTGGT CCACCAGATC AGCATCGCCA CGCGTGAACA ATCCGTAGGC ATCGCCCAGG TCAACGACGC CGTGGCCCAG CTGGACTCCG TCACCCAGCA AAACGCCGCC CTGGTCGAAC AATCGGCCGG CGCAGCCGGT TCACTGCGCG CCAGCGCCCA GTCGCTGGAG CGGTCGCTGG AGGTGTTTAC GTTGCGGTGA
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Protein sequence | MRVNLPVSQL NYDFPGDELL VSVTNTKGEI THCNPAFVRV SGYSYEELIE QPHNLIRHPD MPAAAFKDMW RTIAHGYPWT ALVKNRRKNG DHYWVRANVT PIMEGGRPRG YLSVRTKPRP DEIEAAEALY ARMRAEADAG QETLRLRGGE LRRLGLAGLW DRRSDLGLTA RMALMLGGVG LAAMLPDLLG WQGAAAWGTR LAALLAGGSF VLWRFQQRCV AGLEQASGFA ADIASCQLGT NMQHDYSGPM GALMQRLQQI QINLRAVVGD VRTEMRGFAT TAHEIAQGSF DLAQRTESQA TSLQQTAASM EEISGTVAQT ADTAQLMAHE SDQSRQVAGK SGAAIQEVGA AMEHIRGSSR RMGEIIGVIE SIAFQTNLLA LNAAVEAARA GEQGRGFAVV AGEVRALAQR SASAAKEISG LINRTVDGIN DGNARMDAAG RTIDGMVDAV GRVSDLVHQI SIATREQSVG IAQVNDAVAQ LDSVTQQNAA LVEQSAGAAG SLRASAQSLE RSLEVFTLR
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