More than 300 homologs were found in PanDaTox collection
for query gene Patl_2247 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
511 aa  1057    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  53.41 
 
 
511 aa  544  1e-153  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  42.38 
 
 
513 aa  409  1e-113  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
522 aa  367  1e-100  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.03 
 
 
514 aa  365  1e-100  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  40.15 
 
 
522 aa  366  1e-100  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  38.88 
 
 
522 aa  365  1e-99  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.15 
 
 
522 aa  364  2e-99  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
533 aa  364  2e-99  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.14 
 
 
522 aa  363  6e-99  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.14 
 
 
522 aa  362  6e-99  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.14 
 
 
522 aa  361  1e-98  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  39.61 
 
 
520 aa  356  5.999999999999999e-97  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.8 
 
 
514 aa  353  4e-96  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  37.6 
 
 
517 aa  347  2e-94  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0602  methyl-accepting chemotaxis protein  35.16 
 
 
536 aa  315  9.999999999999999e-85  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  36.26 
 
 
520 aa  312  6.999999999999999e-84  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  36.53 
 
 
520 aa  306  6e-82  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.35 
 
 
521 aa  297  3e-79  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  37.35 
 
 
521 aa  297  3e-79  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.33 
 
 
523 aa  294  3e-78  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.34 
 
 
521 aa  289  1e-76  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  35.14 
 
 
521 aa  288  1e-76  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  34.94 
 
 
521 aa  287  2.9999999999999996e-76  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.45 
 
 
524 aa  287  4e-76  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.88 
 
 
521 aa  285  2.0000000000000002e-75  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  35.65 
 
 
521 aa  285  2.0000000000000002e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  35.44 
 
 
521 aa  283  6.000000000000001e-75  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
521 aa  282  8.000000000000001e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  36.55 
 
 
521 aa  281  1e-74  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  35.27 
 
 
521 aa  281  1e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.38 
 
 
526 aa  281  2e-74  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  34.25 
 
 
524 aa  280  4e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
521 aa  280  4e-74  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_007005  Psyr_3735  PAS  35 
 
 
521 aa  279  9e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  35.58 
 
 
521 aa  278  2e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  32.81 
 
 
518 aa  277  3e-73  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.27 
 
 
524 aa  275  2.0000000000000002e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
524 aa  266  5e-70  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.18 
 
 
516 aa  266  5.999999999999999e-70  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  30.65 
 
 
505 aa  265  2e-69  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
524 aa  265  2e-69  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
538 aa  263  8e-69  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
524 aa  261  2e-68  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.5 
 
 
521 aa  261  2e-68  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
524 aa  261  2e-68  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
524 aa  261  3e-68  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
515 aa  261  3e-68  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.18 
 
 
524 aa  261  3e-68  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.76 
 
 
521 aa  259  8e-68  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
522 aa  257  3e-67  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  32.09 
 
 
518 aa  257  4e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
522 aa  257  4e-67  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
522 aa  256  9e-67  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  38.93 
 
 
419 aa  256  1.0000000000000001e-66  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  33.75 
 
 
524 aa  255  1.0000000000000001e-66  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
522 aa  255  1.0000000000000001e-66  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.91 
 
 
524 aa  255  1.0000000000000001e-66  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.91 
 
 
524 aa  255  1.0000000000000001e-66  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  35.09 
 
 
523 aa  254  2.0000000000000002e-66  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.62 
 
 
517 aa  255  2.0000000000000002e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.44 
 
 
522 aa  253  4.0000000000000004e-66  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  31.91 
 
 
521 aa  253  5.000000000000001e-66  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  33.73 
 
 
527 aa  253  7e-66  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  34.59 
 
 
522 aa  253  7e-66  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
534 aa  251  2e-65  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.96 
 
 
524 aa  251  3e-65  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  33.67 
 
 
520 aa  249  6e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.86 
 
 
522 aa  249  6e-65  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.02 
 
 
527 aa  249  1e-64  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.66 
 
 
522 aa  247  4.9999999999999997e-64  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.66 
 
 
522 aa  246  6e-64  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  32.69 
 
 
529 aa  245  9.999999999999999e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  33.89 
 
 
521 aa  244  3e-63  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.19 
 
 
521 aa  244  3e-63  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
521 aa  243  7e-63  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  31.29 
 
 
532 aa  241  2e-62  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  34.87 
 
 
531 aa  238  1e-61  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  32.5 
 
 
516 aa  238  1e-61  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
532 aa  236  1.0000000000000001e-60  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
532 aa  233  6e-60  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  30.13 
 
 
557 aa  224  3e-57  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  32.14 
 
 
549 aa  218  2e-55  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3538  aerotaxis receptor  31.04 
 
 
506 aa  207  4e-52  Escherichia coli E24377A  Bacteria  normal  0.840702  n/a   
 
 
-
 
NC_010468  EcolC_0628  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.04 
 
 
506 aa  207  4e-52  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.43 
 
 
514 aa  207  5e-52  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0674  PAS  30.15 
 
 
544 aa  206  7e-52  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.94 
 
 
561 aa  206  7e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_010658  SbBS512_E3508  aerotaxis receptor  30.84 
 
 
506 aa  206  1e-51  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  30.59 
 
 
514 aa  205  2e-51  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_010498  EcSMS35_3366  aerotaxis receptor  30.84 
 
 
506 aa  204  4e-51  Escherichia coli SMS-3-5  Bacteria  normal  0.775088  normal 
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  29.61 
 
 
514 aa  203  5e-51  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.23 
 
 
514 aa  203  5e-51  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4385  aerotaxis receptor  30.84 
 
 
506 aa  203  7e-51  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.472426  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.3 
 
 
551 aa  202  9e-51  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  29.36 
 
 
529 aa  201  1.9999999999999998e-50  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_009075  BURPS668_A0485  aerotaxis sensor receptor  30 
 
 
514 aa  201  1.9999999999999998e-50  Burkholderia pseudomallei 668  Bacteria  normal  0.537813  n/a   
 
 
-
 
NC_012917  PC1_2292  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.54 
 
 
517 aa  201  1.9999999999999998e-50  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1814  aerotaxis receptor  30 
 
 
514 aa  201  1.9999999999999998e-50  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0801  methyl-accepting chemotaxis protein  30 
 
 
514 aa  201  1.9999999999999998e-50  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
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