More than 300 homologs were found in PanDaTox collection
for query gene VC0395_0602 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_0602  methyl-accepting chemotaxis protein  100 
 
 
536 aa  1101    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  60.58 
 
 
520 aa  626  1e-178  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  59.42 
 
 
520 aa  594  1e-168  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  40.49 
 
 
522 aa  372  1e-102  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.69 
 
 
522 aa  374  1e-102  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
522 aa  375  1e-102  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
533 aa  374  1e-102  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  38.21 
 
 
511 aa  370  1e-101  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.16 
 
 
522 aa  370  1e-101  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.88 
 
 
514 aa  370  1e-101  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.16 
 
 
522 aa  370  1e-101  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.16 
 
 
522 aa  370  1e-101  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  39.76 
 
 
520 aa  366  1e-100  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
522 aa  369  1e-100  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.49 
 
 
514 aa  366  1e-100  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  37.84 
 
 
513 aa  362  6e-99  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  37.33 
 
 
517 aa  344  2e-93  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.16 
 
 
511 aa  315  1.9999999999999998e-84  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.5 
 
 
523 aa  275  2.0000000000000002e-72  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.08 
 
 
521 aa  269  8e-71  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  33.2 
 
 
505 aa  269  1e-70  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  33.27 
 
 
518 aa  262  1e-68  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  35.4 
 
 
516 aa  262  1e-68  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  33.09 
 
 
524 aa  261  2e-68  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  34.59 
 
 
521 aa  261  3e-68  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  34.04 
 
 
527 aa  257  4e-67  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.29 
 
 
521 aa  256  5e-67  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  34.23 
 
 
521 aa  255  1.0000000000000001e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  34.47 
 
 
521 aa  253  5.000000000000001e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.12 
 
 
517 aa  253  6e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  34.07 
 
 
521 aa  250  4e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  33.99 
 
 
515 aa  250  5e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.84 
 
 
521 aa  248  2e-64  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_007005  Psyr_3406  PAS  33.86 
 
 
521 aa  248  3e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
521 aa  248  3e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  34.21 
 
 
521 aa  246  4.9999999999999997e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
521 aa  247  4.9999999999999997e-64  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  34.38 
 
 
521 aa  246  8e-64  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  34.95 
 
 
531 aa  245  9.999999999999999e-64  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.66 
 
 
527 aa  245  1.9999999999999999e-63  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
524 aa  243  6e-63  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
524 aa  242  1e-62  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.1 
 
 
524 aa  242  1e-62  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
524 aa  241  2e-62  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.98 
 
 
521 aa  241  2e-62  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.22 
 
 
524 aa  239  5.999999999999999e-62  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.52 
 
 
516 aa  240  5.999999999999999e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.77 
 
 
524 aa  239  8e-62  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.67 
 
 
526 aa  239  8e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  34.21 
 
 
529 aa  239  1e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  35.47 
 
 
518 aa  238  2e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  35.44 
 
 
524 aa  238  2e-61  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.61 
 
 
521 aa  235  2.0000000000000002e-60  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_007005  Psyr_3735  PAS  32.91 
 
 
521 aa  234  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.67 
 
 
524 aa  233  4.0000000000000004e-60  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  33.08 
 
 
521 aa  233  5e-60  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  32.54 
 
 
521 aa  233  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
532 aa  233  5e-60  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  33.6 
 
 
524 aa  232  1e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.74 
 
 
524 aa  232  1e-59  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  32.57 
 
 
524 aa  232  1e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  32.15 
 
 
520 aa  231  2e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
534 aa  231  3e-59  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  32.51 
 
 
523 aa  230  4e-59  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.14 
 
 
524 aa  230  6e-59  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
522 aa  229  7e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
521 aa  226  8e-58  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  31.34 
 
 
557 aa  226  1e-57  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  36.25 
 
 
521 aa  225  2e-57  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  31.05 
 
 
532 aa  223  9e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.8 
 
 
521 aa  221  1.9999999999999999e-56  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33 
 
 
522 aa  219  1e-55  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_012912  Dd1591_0805  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.71 
 
 
511 aa  218  2e-55  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  32.58 
 
 
522 aa  218  2.9999999999999998e-55  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  35.11 
 
 
419 aa  218  2.9999999999999998e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.1 
 
 
522 aa  218  2.9999999999999998e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  33.89 
 
 
522 aa  217  5e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  30.56 
 
 
544 aa  217  5e-55  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  33.67 
 
 
538 aa  216  5.9999999999999996e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.5 
 
 
522 aa  216  9e-55  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
522 aa  216  9.999999999999999e-55  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  33 
 
 
522 aa  215  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.91 
 
 
522 aa  216  9.999999999999999e-55  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_009436  Ent638_3527  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
506 aa  215  1.9999999999999998e-54  Enterobacter sp. 638  Bacteria  normal  normal  0.538358 
 
 
-
 
NC_010552  BamMC406_5244  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.14 
 
 
514 aa  214  2.9999999999999995e-54  Burkholderia ambifaria MC40-6  Bacteria  normal  0.362794  normal 
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.1 
 
 
520 aa  212  2e-53  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4385  aerotaxis receptor  32.5 
 
 
506 aa  209  1e-52  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.472426  normal 
 
 
-
 
NC_011149  SeAg_B3403  aerotaxis receptor  33.72 
 
 
506 aa  209  1e-52  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3573  aerotaxis receptor  33.72 
 
 
506 aa  209  1e-52  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0352648  normal  0.227962 
 
 
-
 
NC_011080  SNSL254_A3477  aerotaxis receptor  32.88 
 
 
506 aa  207  3e-52  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3511  aerotaxis receptor  32.88 
 
 
506 aa  207  3e-52  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.00000000402751 
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.17 
 
 
514 aa  207  3e-52  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3407  aerotaxis receptor  32.69 
 
 
506 aa  207  4e-52  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  32.08 
 
 
549 aa  207  5e-52  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_0628  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.11 
 
 
506 aa  205  2e-51  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3366  aerotaxis receptor  32.31 
 
 
506 aa  205  2e-51  Escherichia coli SMS-3-5  Bacteria  normal  0.775088  normal 
 
 
-
 
NC_009801  EcE24377A_3538  aerotaxis receptor  32.31 
 
 
506 aa  205  2e-51  Escherichia coli E24377A  Bacteria  normal  0.840702  n/a   
 
 
-
 
CP001509  ECD_02941  fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component  32.12 
 
 
506 aa  204  3e-51  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0629  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.12 
 
 
506 aa  204  3e-51  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3253  aerotaxis receptor  32.12 
 
 
506 aa  204  3e-51  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
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