More than 300 homologs were found in PanDaTox collection
for query gene Sama_0532 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
523 aa  1073    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.08 
 
 
524 aa  495  1e-139  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  48.65 
 
 
524 aa  489  1e-137  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.41 
 
 
524 aa  485  1e-136  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  51.18 
 
 
522 aa  485  1e-136  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.18 
 
 
522 aa  482  1e-135  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  51.37 
 
 
522 aa  483  1e-135  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  51.18 
 
 
522 aa  485  1e-135  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.62 
 
 
523 aa  471  1.0000000000000001e-131  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  51.57 
 
 
538 aa  470  1.0000000000000001e-131  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  50.59 
 
 
522 aa  467  9.999999999999999e-131  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.98 
 
 
522 aa  465  9.999999999999999e-131  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.78 
 
 
522 aa  464  1e-129  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.78 
 
 
522 aa  462  1e-129  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  36.47 
 
 
518 aa  337  2.9999999999999997e-91  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
521 aa  330  3e-89  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  37.4 
 
 
521 aa  330  5.0000000000000004e-89  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.34 
 
 
521 aa  329  7e-89  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  37.48 
 
 
521 aa  327  2.0000000000000001e-88  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  36.57 
 
 
529 aa  327  2.0000000000000001e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  37.48 
 
 
521 aa  327  5e-88  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3406  PAS  37.64 
 
 
521 aa  326  7e-88  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.21 
 
 
521 aa  325  1e-87  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  37.09 
 
 
521 aa  324  2e-87  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  36.85 
 
 
521 aa  323  5e-87  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
531 aa  320  3e-86  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.96 
 
 
523 aa  317  3e-85  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  36.33 
 
 
521 aa  315  9.999999999999999e-85  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.48 
 
 
526 aa  314  1.9999999999999998e-84  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
524 aa  311  2e-83  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.98 
 
 
524 aa  311  2e-83  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  34.35 
 
 
524 aa  310  2.9999999999999997e-83  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.42 
 
 
524 aa  310  4e-83  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.96 
 
 
524 aa  310  4e-83  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  34.35 
 
 
524 aa  310  5e-83  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.35 
 
 
524 aa  310  5e-83  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
532 aa  309  9e-83  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
522 aa  308  2.0000000000000002e-82  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
532 aa  303  4.0000000000000003e-81  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  36.45 
 
 
521 aa  301  2e-80  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  34.94 
 
 
524 aa  299  8e-80  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.09 
 
 
521 aa  298  1e-79  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
532 aa  298  2e-79  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
524 aa  298  2e-79  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.59 
 
 
521 aa  296  9e-79  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  37.5 
 
 
521 aa  294  3e-78  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
534 aa  293  4e-78  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
515 aa  288  1e-76  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.15 
 
 
521 aa  287  2.9999999999999996e-76  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.73 
 
 
516 aa  287  4e-76  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  34.09 
 
 
521 aa  284  3.0000000000000004e-75  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  34.22 
 
 
521 aa  282  1e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  32.55 
 
 
516 aa  281  3e-74  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.1 
 
 
511 aa  276  5e-73  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  33.47 
 
 
511 aa  268  2.9999999999999995e-70  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.53 
 
 
518 aa  267  4e-70  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.82 
 
 
517 aa  263  4.999999999999999e-69  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.28 
 
 
521 aa  260  4e-68  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
524 aa  260  5.0000000000000005e-68  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
419 aa  259  6e-68  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.29 
 
 
522 aa  258  2e-67  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.81 
 
 
514 aa  258  2e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
521 aa  257  3e-67  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
520 aa  256  6e-67  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.09 
 
 
522 aa  256  1.0000000000000001e-66  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.09 
 
 
522 aa  254  2.0000000000000002e-66  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  34.69 
 
 
527 aa  254  4.0000000000000004e-66  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  33.6 
 
 
513 aa  253  7e-66  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  33.64 
 
 
521 aa  251  2e-65  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.93 
 
 
514 aa  251  2e-65  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  31.13 
 
 
520 aa  249  8e-65  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  34.52 
 
 
517 aa  247  4e-64  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0602  methyl-accepting chemotaxis protein  33.27 
 
 
536 aa  246  4.9999999999999997e-64  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
522 aa  246  6e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.45 
 
 
527 aa  246  9e-64  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
533 aa  241  2.9999999999999997e-62  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
522 aa  240  5e-62  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
522 aa  239  9e-62  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.21 
 
 
522 aa  238  1e-61  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.68 
 
 
598 aa  238  3e-61  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  31.27 
 
 
557 aa  235  1.0000000000000001e-60  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.55 
 
 
566 aa  234  3e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.16 
 
 
564 aa  234  3e-60  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.68 
 
 
556 aa  230  4e-59  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  30.39 
 
 
569 aa  229  9e-59  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  33.48 
 
 
565 aa  229  1e-58  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.93 
 
 
561 aa  228  1e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  32.45 
 
 
520 aa  228  2e-58  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_3399  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.24 
 
 
511 aa  228  2e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  31.35 
 
 
580 aa  227  4e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  31.35 
 
 
580 aa  227  4e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  31.35 
 
 
580 aa  227  4e-58  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  31.35 
 
 
580 aa  227  4e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_009436  Ent638_2094  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
511 aa  227  5.0000000000000005e-58  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  31.18 
 
 
583 aa  226  7e-58  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  31.18 
 
 
623 aa  226  1e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  31.18 
 
 
669 aa  224  2e-57  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  31.03 
 
 
544 aa  225  2e-57  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  33.88 
 
 
520 aa  224  3e-57  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  30.8 
 
 
583 aa  223  6e-57  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
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