| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2257 |
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| Symbol | aer-1 |
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| ID | 1045149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2573242 |
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| End bp | 2574807 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637145676 |
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| Product | aerotaxis receptor Aer-1 |
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| Protein accession | NP_744406 |
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| Protein GI | 26988981 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.215452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0215353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTCA ACTTGCCGGT AACCCCGGTC GAGCAACGTT TTCCCCCCCA TCAGCGGCTG
ATTTCTGCTA CCGATACCGC CAGCCTGATC ACCTACTGCA ACCCAGAGTT TGCCGCCATC
AGTGGCTACA GCGAGGCCGA ACTGATCGGC AGCCCGCACA ACCTGGTGCG CCACCCGGAC
ATGCCGCCGG CGGTGTACGA GTTGATGTGG CGCTACCTGA AAGCCGGCAA GAGCTGGATG
GGTATCGTCA AGAACCGCTG CCGTAACGGC GACTACTACT GGGTCAATGC CTACGTCACG
CCCATCCTCG AAGGTGGGCG GGTAGTGGGT TACGAGTCGG TGCGCGTATG CCCTACGCGC
GAGCAAGTAG CCCGTGCCGA AGCCCTGTAT GCGCGGCTGC GCAACGGCCA GGCGGCATTG
TCGGCGCCGC GCCGGCTGAG CTTGCTGGCG CAGGCCTTGG CCTTGCCACT GGCCGGTGGG
CTGCTGGCGG TGGGGGCCAA CCATCTGTGG CCTGGCCTGG TGGGGCAGGG GCTGACCCTG
GGGCTGTTCG TGGCCTGCGG CCTGTGGGTG CGCAATGCCC TCGGGCGGCA GCTGCAGCAG
ATTGTGCAGG GTGCCGAAGG TGCCTTCGCC GACCCGATTG CAGCCTTGAC CTACAGCGAC
CTGTCGGGTG CTGCCGGGCA GTTGCAACTG ATGCTGATCA GCGAAGAGGC ACGCCTGAAA
ACCGCCTTGA CGCGGCTAAG CGACCTGGCC GGGCAAATGG CCGTGGCCGC TCGCGATGCC
GGGCAGTTGT CGCGCAGCAC CGAGGCGGCA TTGCTGGAGC AGCGTGCCGA AACCGATCTG
AGCGCCACTG CAATGAACCA GATGGCCGCC TCCATTGGCG AAGTGGCCAA CCACGTGCAG
TTGACCGCCG CCGAGGCACA CACGGCGCAC TTGCTGGCCG AGCAAGGTAG CCAGGTGGCC
GATGCCAGCG GTGCGGCCAT TCGTAACCTG GCCAGCACCG TGACGCAGAT CAACCAGGCG
GTCAGCCACC TGGCGGGTCA GACCGGCGCC ATCGCCGAGG CCGCCGGGAT GATCCGCGGC
ATTGCCGAGC AAACCAACCT GCTGGCCCTC AACGCCGCCA TCGAGGCTGC CCGTGCGGGC
GAGCAGGGCC GGGGCTTTGC CGTGGTCGCC GACGAGGTGC GGGCACTGGC CGACAAGACC
CGCCAGTCCA CCCTGCACAT CCAGGCCATC ATCGATGCCC TGCGCAGTGG CGCCGAGGAA
GCCGTGGCGA TCGCCAGCCG AGGCATCGAC GGTGCCGAGC AGGGCGTTGC CCAGGTGCAG
GAAGCTCGGC AGGCGCTGCA TGGCATTCGT GACGCGGTAC AGCGCATCAG CGATATGAGC
CAGCAGATGG CCACCGCCTC GCAGCAGCAG TCGGCGGTGG CAGAAGACGT TTCGCGGCAG
ATCAACGGCG TAGCCGGTAT TGCCCAGCAC AGCGCCCATA GCGCCAACGC CGCCGCCTCG
CGCGGTACCG AACTGGAACA CGTGTGCGCC GGATTGCGCG CCCTGGTGGA GCGCTTCAAC
CGCTAA
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| Protein sequence | MRLNLPVTPV EQRFPPHQRL ISATDTASLI TYCNPEFAAI SGYSEAELIG SPHNLVRHPD
MPPAVYELMW RYLKAGKSWM GIVKNRCRNG DYYWVNAYVT PILEGGRVVG YESVRVCPTR
EQVARAEALY ARLRNGQAAL SAPRRLSLLA QALALPLAGG LLAVGANHLW PGLVGQGLTL
GLFVACGLWV RNALGRQLQQ IVQGAEGAFA DPIAALTYSD LSGAAGQLQL MLISEEARLK
TALTRLSDLA GQMAVAARDA GQLSRSTEAA LLEQRAETDL SATAMNQMAA SIGEVANHVQ
LTAAEAHTAH LLAEQGSQVA DASGAAIRNL ASTVTQINQA VSHLAGQTGA IAEAAGMIRG
IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRALADKT RQSTLHIQAI IDALRSGAEE
AVAIASRGID GAEQGVAQVQ EARQALHGIR DAVQRISDMS QQMATASQQQ SAVAEDVSRQ
INGVAGIAQH SAHSANAAAS RGTELEHVCA GLRALVERFN R
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