Gene Shew185_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3097 
Symbol 
ID5370206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3691080 
End bp3692648 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content50% 
IMG OID640831343 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001367291 
Protein GI153001610 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA GTAACGCGTC TGCCCACAGA ACACTGAATG CACAGAGATC AGATCAAGAA 
ATCCGCTTAA CACCACAAGA TGAACTCATT TCCACCACCG ACACTCGCGG TGTTATCACA
TACGTTAATG CCCGTTTTGC CGAAGTCTCA GGCTATAGCG CCCAAGAGTT AATTGGCAGT
GCCCACAACA TGGTTCGCCA TCCCGATATG CCGAGCGCCG CCTTTAAAGA AATGTGGGAA
AAGCTTAAGT CGGGCCAATC TTGGCGAGGC ATAGTGAAAA ACCGCTGTAA AAATGGTGGC
TTCTATTGGG TCGATGCCTT TGTCTCGCCA TTGTTTGAAA ACGGCACCAT TGTCGGTTAT
CAATCGGTAC GTATTCAGCC TCAGGCCGCC TACGTCAGCA AAGCAAATGA GATATACCAA
AGACTTAAAC TGGATAAATC CATTTCTAAG CCCTTAAGCT TAATGCAAAA ACGTATCCTC
TCGGCGGTTG TCGCCTCAAC AGGCTTACTG ATCGCAGGCT ACTTTTGGGG CTGGGGCGTG
ATTATCGCGG GGGCGGTTTT GATGAGTTTA AACTTGGCTA TTTTCTACGA TGAGGCCTTT
CGCATTCCCG CTAAACTGAT TGAAATGCAA ACCAAATACG ACTCTATCAG TCGTTACATC
TACTCGGGTG CCGATACGTC TTCTATCCTC GATTTCCAGC TCATCATGCT GCAAGCCAAA
ATGAATGGCG TACTGGGGCG AACTCAAGAT CAAGCCAATC AATTGCACGC GATTGCCGAT
CAATTAGTGG TCGCGACCGA GCAAACCTAT GTCAGCCTAG ATCAAGAGAA AAGTCAGTTA
GAACAGCTCT CTGGCGCGAT GGAAGAAATG AGTTCAACCA TCACAGAAGT GGCGCAGAAT
ACCCATCTCA CGTCCACCAG CATCAATACC GCCTACGATC TCTGCCTTAA AAGCAGCGCC
AATATGAAGG CCAACACTCA AAAAGTGGAA CAACTGGCCA AGTCTGTTGC CGATGCCGCT
AACAATGCCC ATCAATTGAA TAAAGAAGCC GAGCAAGTTG CTAATGCGAT GGGCGAAATT
GACTCCATCG CCGAGCAAAC CAATCTTCTC GCCCTCAATG CGGCCATTGA AGCTGCCCGT
GCGGGTGAAC AAGGCCGTGG GTTTGCCGTG GTCGCCGATG AAGTGCGCGC GCTGTCGAGC
CGAACCCAAC TGTCGACCAA CAGTATTTCA AAAAGTGTCG ATAAGATGTT CACTATGCTC
AACGCATGGG CCAAAGAAAT GGAACAAAGC CGCCAACACG CGGAGCGCTG CGCTAGCGAC
ATCCAACTGT CCGCCGACAA TGTGAATACC ATTTACCAAG AAGTGAGTGA TATCCACACC
TTTGCCCAGC AAAATGCGGT CGCAGCGGAT CAACAGCGTC AAGTGGTCAA CGAGATTGCC
AGCAACATAC ACTCCATCAC CCATTCAAGC GCAGAGAACT TGGCCGCGAC CCATCTGATT
GGTGATGCCG CCCATCTGCT TAAGCATAAT GCCGAGAAAG CCCTCGGCTT GAGACGCACC
TTCGGTTAG
 
Protein sequence
MSQSNASAHR TLNAQRSDQE IRLTPQDELI STTDTRGVIT YVNARFAEVS GYSAQELIGS 
AHNMVRHPDM PSAAFKEMWE KLKSGQSWRG IVKNRCKNGG FYWVDAFVSP LFENGTIVGY
QSVRIQPQAA YVSKANEIYQ RLKLDKSISK PLSLMQKRIL SAVVASTGLL IAGYFWGWGV
IIAGAVLMSL NLAIFYDEAF RIPAKLIEMQ TKYDSISRYI YSGADTSSIL DFQLIMLQAK
MNGVLGRTQD QANQLHAIAD QLVVATEQTY VSLDQEKSQL EQLSGAMEEM SSTITEVAQN
THLTSTSINT AYDLCLKSSA NMKANTQKVE QLAKSVADAA NNAHQLNKEA EQVANAMGEI
DSIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRALSS RTQLSTNSIS KSVDKMFTML
NAWAKEMEQS RQHAERCASD IQLSADNVNT IYQEVSDIHT FAQQNAVAAD QQRQVVNEIA
SNIHSITHSS AENLAATHLI GDAAHLLKHN AEKALGLRRT FG