Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2726 |
Symbol | |
ID | 5079941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3152500 |
End bp | 3154116 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499912 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001184244 |
Protein GI | 146293820 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAAAAT GCCATTCACA TTTTTACCGA GAGCCAACCC TTAACCCTAT GCAAACACAT CCTACAAAAG GTGAGAAACA CCTGTCTGAT AATGCGATTT TACTCTCTAC CACGGATTTG AAGGGAAACA TTAAGTATGT TAACCAGACA TTTTCAAATA TCAGTGAGTT TAACGTCGAT GAGTTGCAGG GGAGTCCCCA TAATATCGTG CGTCATCCCG ATATGCCTGC TGCGGCATTT AAGATGCTCT GGGAGCGGAT AAAGAGTGGC AAGCCCTGGA TGGGGATCGT TAAAAATCGC ACTAAGAGTG GCGATTACTA TTGGGTTAAT GCCTACGTTG CTCCTGTATA TGAGAATGGT GAAATTCATG AATATCAATC TGTTCGCCGC CAAGCGACGC CTGAGCAGAT TAAAGCTGCC GAGAGTATTT ATCAGGATAT TAATCAAGGC AAAAAACCTA AAGCTTTGAA AAAAGACAAG TTAGGATTTA GTGGAAAAAT ACTGGCTGCG ATGCTTTTCT CCATTATGAT CACCGCTTAT GTTGCCAGTT ATTCTCCATT ACTTGCGGCT TTTAGTGGCG GGATATTTGC GGTTATTGCT TGGTTTGTTT TGATGAAGCC ACTACATAAT CTTGTCTCTA TTGCGACAAA TATTATTGAT GATCCTGTTG CTATGGGGGT GTATACGGGG CGTCAAGATG AAATCGGTAA GCTGGATCTG GCTTTACGCT TCTTAATCAC AGAAATTGGT GGTGTGGTCG GGCGAATGGC TGATTCTGCG AGTGAAATTC AGCAGCAGAG TGTCAGTTTA AAGCAAACCA TTACTAATAC ATGGGAACAT GCTGATAGTC AGAGTGAACA AACGACCCAA GCCGCCACGG CAATGGAGCA AATGAGTGCG AGTTTTGCTG AAGTGACGGG CAATATTCAT CGTACCGCTT CGGAAATGGT ATCTAGCCAT CAGGCGGCTC AGCGTGGACA TTCACGTCTT GAAACGGTAA TCGATGCGAT ACATCAGTTG AGTGTACAGG TAAGCCACTT TTCAGATGTG GTTGCAACGA TTGAAGAAGA TAGTCGTGCC ATTCATCAGG TATTAGAAGT GATCCGCGCT ATTGCCGATC AAACCAATCT ATTAGCCCTT AATGCTGCGA TTGAGGCGGC TCGTGCTGGG GAGAGTGGTC GTGGTTTTGC TGTTGTTGCT GATGAAGTAC GACAACTATC AAGCCGTACG AGTCAGTCAA CCTCACAAAT AGAAATGATT GTAGGCCGAT TTAGGGACAG CACCCAAAAA GCAACGTCCA CCATGATGGC AGGACAAGAG CAGGTCAAAC GGTCCGTTGC GCTTGCAGAG GATGCCAGTG TGGCTTTTGG TGAGTTATTG TCATCGATTA CGCGGATCAA CTCTTTGAGC GATGATAATG CCGCAGCAAT GACCCAACAG GCGTCGGTTG CTGCCGAGAT CAGTCGCGCA ATTCATGTCA TCAGTGACTT AGCTCATCAG AGTCTACAAC AAACCCAAGA TGCAGCGGCG AGGGGCGACC AAGTCTCGCG TTTATCCACT AAAACCCATC ATTTATCCCA GCAGTTTTGG CAACAGAGTG TACAACGTAA ATATTGA
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Protein sequence | MAKCHSHFYR EPTLNPMQTH PTKGEKHLSD NAILLSTTDL KGNIKYVNQT FSNISEFNVD ELQGSPHNIV RHPDMPAAAF KMLWERIKSG KPWMGIVKNR TKSGDYYWVN AYVAPVYENG EIHEYQSVRR QATPEQIKAA ESIYQDINQG KKPKALKKDK LGFSGKILAA MLFSIMITAY VASYSPLLAA FSGGIFAVIA WFVLMKPLHN LVSIATNIID DPVAMGVYTG RQDEIGKLDL ALRFLITEIG GVVGRMADSA SEIQQQSVSL KQTITNTWEH ADSQSEQTTQ AATAMEQMSA SFAEVTGNIH RTASEMVSSH QAAQRGHSRL ETVIDAIHQL SVQVSHFSDV VATIEEDSRA IHQVLEVIRA IADQTNLLAL NAAIEAARAG ESGRGFAVVA DEVRQLSSRT SQSTSQIEMI VGRFRDSTQK ATSTMMAGQE QVKRSVALAE DASVAFGELL SSITRINSLS DDNAAAMTQQ ASVAAEISRA IHVISDLAHQ SLQQTQDAAA RGDQVSRLST KTHHLSQQFW QQSVQRKY
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