More than 300 homologs were found in PanDaTox collection
for query gene Shew_2577 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
524 aa  1061    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  51.53 
 
 
524 aa  532  1e-150  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.53 
 
 
524 aa  528  1e-149  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.88 
 
 
523 aa  513  1e-144  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  52.41 
 
 
523 aa  488  1e-136  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
522 aa  460  9.999999999999999e-129  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
522 aa  461  9.999999999999999e-129  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  47.54 
 
 
538 aa  460  9.999999999999999e-129  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  47.74 
 
 
522 aa  457  1e-127  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
522 aa  456  1e-127  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.18 
 
 
522 aa  458  1e-127  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.28 
 
 
522 aa  453  1.0000000000000001e-126  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.47 
 
 
522 aa  452  1.0000000000000001e-126  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.28 
 
 
522 aa  451  1e-125  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  37.62 
 
 
529 aa  331  2e-89  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  36.88 
 
 
518 aa  325  1e-87  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.07 
 
 
521 aa  323  7e-87  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
521 aa  322  9.999999999999999e-87  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.82 
 
 
521 aa  322  9.999999999999999e-87  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  37.88 
 
 
521 aa  321  1.9999999999999998e-86  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.76 
 
 
524 aa  316  8e-85  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.57 
 
 
524 aa  314  2.9999999999999996e-84  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  37.79 
 
 
521 aa  313  3.9999999999999997e-84  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  37.14 
 
 
524 aa  312  1e-83  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.31 
 
 
524 aa  310  4e-83  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
524 aa  306  4.0000000000000004e-82  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
524 aa  305  9.000000000000001e-82  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
532 aa  304  2.0000000000000002e-81  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.58 
 
 
524 aa  305  2.0000000000000002e-81  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
524 aa  305  2.0000000000000002e-81  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
522 aa  301  1e-80  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.98 
 
 
521 aa  302  1e-80  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  36.79 
 
 
521 aa  301  2e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
521 aa  301  2e-80  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.51 
 
 
526 aa  300  4e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  36.79 
 
 
521 aa  300  4e-80  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  35 
 
 
524 aa  300  5e-80  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  37.12 
 
 
521 aa  300  6e-80  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.84 
 
 
511 aa  298  1e-79  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
515 aa  298  1e-79  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  39.4 
 
 
531 aa  296  6e-79  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.18 
 
 
523 aa  293  5e-78  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  36.66 
 
 
521 aa  291  2e-77  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
532 aa  290  4e-77  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  36.85 
 
 
521 aa  284  3.0000000000000004e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  34.61 
 
 
511 aa  283  8.000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.24 
 
 
516 aa  278  2e-73  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  35.48 
 
 
516 aa  274  3e-72  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  33.84 
 
 
521 aa  274  4.0000000000000004e-72  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  33.21 
 
 
521 aa  273  6e-72  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  35.96 
 
 
517 aa  273  7e-72  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  35.24 
 
 
518 aa  271  2e-71  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  35.38 
 
 
513 aa  270  2.9999999999999997e-71  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.7 
 
 
514 aa  268  1e-70  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  35.19 
 
 
521 aa  268  2e-70  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.77 
 
 
514 aa  268  2e-70  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
532 aa  267  4e-70  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.9 
 
 
521 aa  266  5e-70  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  34.99 
 
 
534 aa  265  1e-69  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.74 
 
 
521 aa  262  8.999999999999999e-69  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
524 aa  261  3e-68  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.86 
 
 
522 aa  258  2e-67  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.57 
 
 
521 aa  258  2e-67  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.79 
 
 
522 aa  258  2e-67  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.79 
 
 
522 aa  258  3e-67  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  33.47 
 
 
520 aa  256  5e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
521 aa  256  9e-67  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  33.86 
 
 
520 aa  255  2.0000000000000002e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
522 aa  254  3e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  36.87 
 
 
419 aa  253  7e-66  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.22 
 
 
517 aa  253  7e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  35.57 
 
 
521 aa  253  8.000000000000001e-66  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
533 aa  252  9.000000000000001e-66  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
522 aa  252  1e-65  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.35 
 
 
522 aa  251  2e-65  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
522 aa  251  3e-65  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0602  methyl-accepting chemotaxis protein  33.96 
 
 
536 aa  249  6e-65  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  33.2 
 
 
527 aa  249  7e-65  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  34.8 
 
 
544 aa  246  9.999999999999999e-64  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  33.67 
 
 
520 aa  246  9.999999999999999e-64  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.48 
 
 
527 aa  244  3.9999999999999997e-63  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
520 aa  242  1e-62  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  31.17 
 
 
557 aa  238  2e-61  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_007298  Daro_1363  PAS  33.14 
 
 
544 aa  236  1.0000000000000001e-60  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.53 
 
 
551 aa  235  2.0000000000000002e-60  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.21 
 
 
598 aa  235  2.0000000000000002e-60  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  34.56 
 
 
529 aa  232  1e-59  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  35.48 
 
 
583 aa  230  4e-59  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  33.53 
 
 
580 aa  228  2e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  33.53 
 
 
580 aa  228  2e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  33.53 
 
 
580 aa  228  2e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  33.53 
 
 
580 aa  228  2e-58  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.76 
 
 
564 aa  226  7e-58  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.98 
 
 
529 aa  226  9e-58  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  33.33 
 
 
583 aa  226  9e-58  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.98 
 
 
529 aa  226  9e-58  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  33.33 
 
 
669 aa  225  1e-57  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  33.33 
 
 
623 aa  226  1e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_24380  aerotaxis receptor Aer  33.01 
 
 
567 aa  224  3e-57  Azotobacter vinelandii DJ  Bacteria  normal  0.0650163  n/a   
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.14 
 
 
514 aa  224  3e-57  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
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