Gene BURPS1710b_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0927 
Symbolaer 
ID3691624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp964024 
End bp965895 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content69% 
IMG OID637727383 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_332340 
Protein GI76809336 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCCA CTCACTCAGC TCTCGCGAAA TCGTCCGTAA ACCCGATCAT GTCGCCGGAT 
TGCGCATTCC ACCGCAGCGG CGACAGACGA CGTTGCGGAT CTTACGGAGA AAACCCCCAC
ATGCGCGCCA ATCTTCCAGT GACTCAGCGG GAATACGATT TTCCCGACGA TGCGACCCTG
ATGTCGACGA CCGACCCTCA GAGCTATGTG ACGTACGCGA ACGCCGCGTT CATTCAGGTG
AGCGGGTTCG AGCGCGACGA AATCATCGGC GAGCCGCACA ATTTCGTTCG GCATCCCGAC
ATGCCGACCG AAGCGTTCGC CGACATGTGG GCGACGCTGA AGGCCGGCCG CTCGTGGACG
GCAGTCATCA AGAACCGCCG CAAGGACGGC GATCATTACT GGGTGCGCGC GAACGCGACA
CCCGTGATTC GCAACGGCCA GCTCGTCGGC TACATGTCGG TGCGCACGAA GCCGTCGCGT
GAGGAGATCG CGCAGGCGGA TGCGCTCTAT CGTGATCTGC GCGAACATCG CGCGCGCGGC
AGGAAGTTTC ACCAGGGCCT CGTCGTGCGC ACCGGGCTCT TCGGATGGAT GTCGCTGCTG
CAGACGATGA GCGCGCGCTG GCGCGTTCGC GCGGCGCTGC TCGCGCTGCT CGCCGGCTCG
GCATGGACGG CGTTCCTCTT CGGGCTGCAC GGCGTGATGT TCGAAGGCTT CGCCGCCACC
GAGACGGTGC TGCTGCTGCT CGCGGAGTGC TGGCTCGCCG CGCAGATCAC GGCGCCGCTG
CAACGCGTGC TGAAGCAATC GCTCGCGGTC GCCGCGGGCC AGGCGGGCGA CAACGTCCAT
CTGAACCGCG TCGACGAGAT CGGCATGATC ATGCGTGCGG TCAATCAGGC GGGGCTCAAT
CTGCGCTCGC TCGTCGACGA CGTGAGCGAG CAGCTATCCG GCCTGCAAGG CGCGAGCGGC
AAGATCGCCG CGGGCAACGA CGATCTGAGC GGCCGCAGCG AGCAGGCGGC CGCGAGCCTC
GAGGAAACCG CCGCGTCGAT GGAGCAGATG ACCGCGACGG TGCGCAACAA CGCGGACACC
GCGACGCAAG CGGGTCAGCT CGCGGGCTCG ACGAGCGCGG CGGCCGAGAA AGGCGATGCG
GTGGTCGGCC AGGTGGTGGC GACGATGGGC GAGATCAGCG CGTCGAGCCG CAAGATCAGC
GAGATCATCG GCGTGATCGA CAGCATCGCG TTCCAGACGA ACATCCTCGC GCTGAACGCG
GCCGTCGAGG CGGCCCGGGC CGGCGAGCAA GGGCGCGGCT TCGCGGTGGT CGCGGCCGAA
GTGCGCACGC TCGCGCAGCG CAGCGCGAAC GCGGCGAAGG AAATCGCGGC GCTGATTCAC
GACAGCGTGC AGAAAACGGC GGCGGGCAGC GCGCTCGTCG ATCAGGCGGG CGACGCGATG
AACGAGATCC GCTCGCAAGT CGCGCAAGTC GCGGGGCTGA TCGGCGAGAT CGGCTCGGCG
ACGCGCGAGC AGTCCGACGG CATCGGCCAA GTCAACGTCG CCGTGACGCA GTTGGACAAG
ATGACGCAAC AGAACGCCGC GCTCGTGCAG GAATCGGCCT CGACGGCCGA CGAACTGAAA
CGCCGCACCC AGCGGCTCGT CGATGCGGTG GCGGTGTTTC GCGTGAACGC GCGCGTGCCC
GCCCGACACG ACGATGCGCG CGCGCCGCGG GCCGGCGCGG CCGCCGCGAT GCGCGAGCGC
GCGTCCGTCG CGCGGCCGCG GCCCGCGATG CGCGCGGCGC CCGCTCCGTC GCTCGCGCTC
GCGAACGCCT CGACGGCGCA AGCCCCCGCG CGGGCGACGG CGAACGCGGA TGCCGACTGG
CAAACGTTCT GA
 
Protein sequence
MDSTHSALAK SSVNPIMSPD CAFHRSGDRR RCGSYGENPH MRANLPVTQR EYDFPDDATL 
MSTTDPQSYV TYANAAFIQV SGFERDEIIG EPHNFVRHPD MPTEAFADMW ATLKAGRSWT
AVIKNRRKDG DHYWVRANAT PVIRNGQLVG YMSVRTKPSR EEIAQADALY RDLREHRARG
RKFHQGLVVR TGLFGWMSLL QTMSARWRVR AALLALLAGS AWTAFLFGLH GVMFEGFAAT
ETVLLLLAEC WLAAQITAPL QRVLKQSLAV AAGQAGDNVH LNRVDEIGMI MRAVNQAGLN
LRSLVDDVSE QLSGLQGASG KIAAGNDDLS GRSEQAAASL EETAASMEQM TATVRNNADT
ATQAGQLAGS TSAAAEKGDA VVGQVVATMG EISASSRKIS EIIGVIDSIA FQTNILALNA
AVEAARAGEQ GRGFAVVAAE VRTLAQRSAN AAKEIAALIH DSVQKTAAGS ALVDQAGDAM
NEIRSQVAQV AGLIGEIGSA TREQSDGIGQ VNVAVTQLDK MTQQNAALVQ ESASTADELK
RRTQRLVDAV AVFRVNARVP ARHDDARAPR AGAAAAMRER ASVARPRPAM RAAPAPSLAL
ANASTAQAPA RATANADADW QTF