Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4269 |
Symbol | |
ID | 6245796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1266095 |
End bp | 1267765 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642596028 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_001860435 |
Protein GI | 186473093 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAACA ATCAGCCTGT CACCCAGAAC GAGTACGACT ATCCGTCCTC GCAAATGCTC GTTTCCGCAA CCGATCTCAA AGGCAAGATC CAGTATTGCA ATCCCGCGTT CATCGCCGTG TCCGGATATT CGCGCGACGA ACTGATCGGC AAGCCGCACA ACCTGATCCG CCATCCCGAC ATGCCCGCCG AAGCCTTCGC CGACATGTGG GCGACGATCG GCGCCGGCCG GCCGTGGTCG GCGTTCGTCA AGAACCGCCG CAAGAACGGC GACTACTACT GGGTGCGCGC GAGCGTTACG CCCGTCGTCG AGAACGGCAC GCCCGTCGGT TACCTGAGCG TGCGCGTCAA ACCGGATCGC GAGCAGATTC GCGCGGCCGA TGCGCTATAC GCGAAGATCC GCGCGGGTGA AGCGCGCGGC GTGCGGCTGC ATCAGGGCGT CGTCGTGCGC ACGGGTCTGC TGGGCAAGCT GGGCGCGCTG ATGCGCCTGC CCGTCGCCGT GCGTGCGACG ATCGGCTACA TGGTCGCGCC CGTTGCAATG CTGGCGGCAG GTCTCGCGGT CTGGGGCGGC ACGCCGCCGC TGCCGTTCTG GATCGCGTTC GGCGTGACGG CCGCGACCAG CGCCGCCGCG GCGCAACTGC TGTCGCGCCA TCTCGGTCAG CCGGTCGACG CGATGTCGTC GTTCGCCACG CGCATGGCCG CGGGCGACCT GACCGCCGAT CTGGCGATTG CACGTCACGA CGACCTCGGC GACGTGCTGC AGGCGCTCAA TCAGCTGAAG GCGAACCTCG CGGCGATCGT ATTCGACGTG CGTGCGCAAA TCGGCGGAAT GCTCGACGCC GCACACGAGA TTTCGACAGG CAACGTCGAT CTCGCGCGCC GTACGGAAAT GCAGGCGGCA TCGCTGGAAG AAACGGCAGC AACGATGGAG CAACTGACGA CCACCGTGCA GGCGAACGCC GATGCGGCGG GGCGCGCGCT CGATCTCGTG CGGGACGCGC AATCGGCGTC CGCGACGGGC GGCAAGGTCG CGCAGCAGGT CGAGCAGACG ATGGCAGGCA TCACCGAGGC GTCGAAGCGG ATCGCCGACA TCACGGGCGT GATCGACGGC ATCGCATTCC AGACCAATAT TCTCGCGCTC AACGCCGCCG TCGAAGCGGC GCGCGCAGGC GAGGCCGGCC GCTCGTTCGC CGTCGTCGCG GGCGAAGTGC GCATGCTCGC GCAACGCTGC GCGGCATCGG CAAAGGAAAT CAAGCAGGTG GTCGATACGA CCGTGAACGA GGTCTCACAG GGCACGCAAC TCGTTGCGCG CACCACCGCA CAGATGGCTG TGATCGATCA GGCCGTGGCG CGGGTGTCGT CGCTGATCGT CGAAGTGGCG AACGCGAGCA GCGAACAGGC CGACGGCATC AGCCAGGTCA ATCAGGCCGT GTCGCATCTG GACAGCGCGA CGCAGCAGAA CGCCGCGCTG GTCGAGCAGG CCGCGGCGAC GGCGCAACGT CTCGCGGAAC AGGCCGACGT GCTCGATGAA GCGGTGCGTC TGTTCAGCGT GGCGGGCGCG CCCGCACAAA GCGCGAAGAA GCAGGCGGTG CGCACGGCGG CGGGGCTGCG CAACCCCGCC GTATCCGCGC ACGCAGCTCA CCGGGAAGTC GAACAGGACG CATTGGTCTG A
|
Protein sequence | MRNNQPVTQN EYDYPSSQML VSATDLKGKI QYCNPAFIAV SGYSRDELIG KPHNLIRHPD MPAEAFADMW ATIGAGRPWS AFVKNRRKNG DYYWVRASVT PVVENGTPVG YLSVRVKPDR EQIRAADALY AKIRAGEARG VRLHQGVVVR TGLLGKLGAL MRLPVAVRAT IGYMVAPVAM LAAGLAVWGG TPPLPFWIAF GVTAATSAAA AQLLSRHLGQ PVDAMSSFAT RMAAGDLTAD LAIARHDDLG DVLQALNQLK ANLAAIVFDV RAQIGGMLDA AHEISTGNVD LARRTEMQAA SLEETAATME QLTTTVQANA DAAGRALDLV RDAQSASATG GKVAQQVEQT MAGITEASKR IADITGVIDG IAFQTNILAL NAAVEAARAG EAGRSFAVVA GEVRMLAQRC AASAKEIKQV VDTTVNEVSQ GTQLVARTTA QMAVIDQAVA RVSSLIVEVA NASSEQADGI SQVNQAVSHL DSATQQNAAL VEQAAATAQR LAEQADVLDE AVRLFSVAGA PAQSAKKQAV RTAAGLRNPA VSAHAAHREV EQDALV
|
| |