| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2247 |
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| Symbol | |
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| ID | 4172401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2729490 |
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| End bp | 2731025 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055257 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_661819 |
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| Protein GI | 109898564 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG TGCGGAACGA TAGTATTGAG CGTGAAGTAT CTGTAGCAAT CGGGGAAGAA
TTAGTATCAA CGACTGACAC TAACGGCATC ATTCAATATG TGAATGACCA CTTTTGTCAC
GTTTCAGGAT TTTCTCGCGA AGAGTTGATT GGTCAACACC ACAACATAGT TAGACATCCC
GACATGCCCA AAGCGGCATT TGCTGACATG TGGGGGAAAC TCAAGGCAAA ACAAGCATGG
AGAGGAGCGG TAAAAAACCG GTGCAAAGGA GGTGGGTATT ATTGGGTCGA TGCGTTCGTT
ACGCCTGTTT TTGAAGAAGG TGAACTCAAG GGATACCAGT CCGTAAGAAC CCACCTTATC
GGGCCTTACA AAAAGAAAGC GCAACAACTG TATGCCAAAT TGAATAAAGG GGGCAATGCA
TTTGGTTGGT TCGATGATAA ATGGAGCGCC AAAGACATGC TCTATAGTAT TTTAGCAACA
GTGTTCATTG CATTAACTTT TGTGTCTCCT TTTTTTGCTC TGTTCCTTTT TCCTCTACCC
TATGTCATTT TTAAGGGGGA GTTGCTTTAT GTGCGGCGCC ACGCAAGATC TCTACGAGCT
CAATATGACA GTGTCTCCCG TGCCATTTTC GCATCAGATG GGATCGCAGG GGTTAGTATT
TTTGCATTGA AAATGCAAGA AGGGAAAGTG AGCACCATTC TCGGACGAGT GGTTGATAGC
ACTTCATCCT TAGATGCGGG TGTAAAGTTT TTACAGCAAG CCGTAATGAG AACGAAGAAA
AGCGTAGAAG ATGAAGCATA TGAATTAACT CAAGTCGCCA CTGCGGTTGA GGAAATGGTG
GCATCCATCA ATGAAGTGAC TCGTAATATT AGCCACACAT CAGAAAAAGT GACCAGTGTT
CACCAAGATT GCCGCCAAGC AACAGATGCT ATGTCTAACA CCATGAACAA AGTTGGCGAT
TTAGCCACTG ATGTGGCTAA ATCTGCTGGC TCTGCGGCAT CGTTAGCAGA AGAAGCTGAT
CGCATTAATG ATGTTATGCA AGAGATTCAA GGGATTGCCG ACCAAACTAA TTTGCTTGCC
TTAAATGCCG CCATAGAAGC AGCTAGAGCA GGGGAGCACG GAAGAGGGTT TTCAGTTGTA
GCAGATGAGG TGCGTGCTTT GTCTAGCAGA ACGCATAATG CGACGACTCA AATTCAGACA
TCGGTCTCAG AAATACAAAG CACTTTATTA ACGTGGTCAC AGACGTTAGA TGAAGGGAAG
AACGCGGCAC AGTCTTGCGT TGAAGAAACA AGACAAACTC AAGATTTGGT GAACAAAGTA
TATGACGATG TGAGTGATAT CGCACAATCA GCTAGTCAAA TGAGCATAGC CGCTGACGAG
CAAAGTTCAA CCGCAGCCAG TATCAGTTCG AACATTACTA ATATCAGTGA TGCCTCTAAA
CATAATCTTG AACAAGTGGA AAGGGTAGAG CAGGAGGCAC AATCCATATC AATGCGTTCT
AAAGCACTCG CCGCAATGGG CCTAACATTC GGTTAA
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| Protein sequence | MSKVRNDSIE REVSVAIGEE LVSTTDTNGI IQYVNDHFCH VSGFSREELI GQHHNIVRHP
DMPKAAFADM WGKLKAKQAW RGAVKNRCKG GGYYWVDAFV TPVFEEGELK GYQSVRTHLI
GPYKKKAQQL YAKLNKGGNA FGWFDDKWSA KDMLYSILAT VFIALTFVSP FFALFLFPLP
YVIFKGELLY VRRHARSLRA QYDSVSRAIF ASDGIAGVSI FALKMQEGKV STILGRVVDS
TSSLDAGVKF LQQAVMRTKK SVEDEAYELT QVATAVEEMV ASINEVTRNI SHTSEKVTSV
HQDCRQATDA MSNTMNKVGD LATDVAKSAG SAASLAEEAD RINDVMQEIQ GIADQTNLLA
LNAAIEAARA GEHGRGFSVV ADEVRALSSR THNATTQIQT SVSEIQSTLL TWSQTLDEGK
NAAQSCVEET RQTQDLVNKV YDDVSDIAQS ASQMSIAADE QSSTAASISS NITNISDASK
HNLEQVERVE QEAQSISMRS KALAAMGLTF G
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