| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3460 |
|---|
| Symbol | |
|---|
| ID | 5367343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3903935 |
|---|
| End bp | 3905497 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640805832 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001342298 |
|---|
| Protein GI | 152997463 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAA TGCCAGTAAC AAATAAAGAA AATGATTTTC CTGATAGCTA TGTTTTAGTT
TCCAGTACAG ATGTGAAGGG ACGCATTACG TTTGTAAATG ATGTTTTCTG TGAGATAGCA
GGTTATAAGC GTGAAGCTCT GATTGGCTCG CCACATAATA TTATCCGTCA CCCTGATGTG
CCACCAGCTG TTTTTGCTGA CATGTGGGCC AATCTCAAAC AGGGTAAAAG TTGGATGGGG
TTGGTAAAAA ATCGCAGTGA AAATGGAGAT CATTACTGGG TAAGTGCTCA TGTAAGTCCC
CTATTAGATG GCAGTAAAGT GATTGGTTAT GAATCTGTGC GTCGCAAAGC AACGCGAGAT
GAAATTCAAC ATGCTCAGTC TATTTATGAT CGTATTAATG CGGGAAAAGG TTTGTTACCA
ATAACGACCA AGATATTTGC GCATTTAAGT AATGCTGCTT GGCCTTTAAT GTTCAGCTTT
ATTTTGTTAG GCATTATTAG TTTATTGTCT AGTGTATTGG CTTTGCAAGC CGCTGGGTCT
ATTTTGGCTT TGTTTGGGAT GTGGTTGACC TATTTTCAGG CTCAGTCTTT GCGGTCTGTT
GTCACTGGTT TATCGACTGA GTCGCATAAC CCAATAGGTC AGTATTTATA CTGTAAAACG
GTAGGAACCA AAGCCGCGAT CAAGTTTGCA AAAATTCATC AAGAAGCGGC TGGTAATACT
TTTCGTTATC GCCTAAAAGA GGGAGCTCAA CAGCTTCGCC AAAGGGCATC GGATGCGAAA
GCCAGTGTGA CAACGAATTT GGTTACTTTC AATAAACAAC GAAATACCTT CCAGGAAGTC
GTTGCTGCTA GTTCTCAACT TTTGTCTAGC GTAACTCATG TGGCAGAACA TGTTCATGTG
GCGGTTGAGG CAACAGAGTC TGTCGGTGGA TTATCTCGTG AGAGTCGTTT GTTGGCTCAG
CAAACGGGTG AGACTATGCG TCAAGTTTAT CAAGATATTT CGGATGCTAA AAAAGTTGTC
GCTATATTAG CTGAACGCAG TGATAGCATT AACGAAGTGG TTAATTCTAT TAGTGGTATT
GCTGAGCAAA CAAATCTGTT GGCGTTGAAT GCGGCCATTG AGTCTGCTCG TGCGGGTGAA
GCTGGGCGTG GGTTTGCGGT GGTTGCGGAT GAAGTTCGAG CATTAGCAAT TCGTACTCAG
AATGCCACGC AGAGTATTCA TAATATGACC GAAGAGCTGA AGAAAAACAC TCTAGATGTG
ACAAATACTA TCGATAAGGG CACAGCGGTC GCGCAGGAAG GTGTTGATAG TGTTAATAAA
GTAGCTCAGA AAATGGGTGA TATAGAAGCG GCTATAAAAC GTGTTGTAGA GATGACGGCA
CAGATCAATG TATCTTCTGA AGAGCAGGCT AGTGTAGCTA GAGATCTAAA TGAGAAGATG
CAAGATGTCG ACTCATTAAG TATTAATAGT ATTGAGCGCG CAGAAAATAT AGTCGTTAAT
ATTAGTCATA TTGAAGAAGA AGCTTATGAG CAAGGCAATC TTGCGGAGCG TATGAAGCAG
TAA
|
|---|
| Protein sequence | MRKMPVTNKE NDFPDSYVLV SSTDVKGRIT FVNDVFCEIA GYKREALIGS PHNIIRHPDV
PPAVFADMWA NLKQGKSWMG LVKNRSENGD HYWVSAHVSP LLDGSKVIGY ESVRRKATRD
EIQHAQSIYD RINAGKGLLP ITTKIFAHLS NAAWPLMFSF ILLGIISLLS SVLALQAAGS
ILALFGMWLT YFQAQSLRSV VTGLSTESHN PIGQYLYCKT VGTKAAIKFA KIHQEAAGNT
FRYRLKEGAQ QLRQRASDAK ASVTTNLVTF NKQRNTFQEV VAASSQLLSS VTHVAEHVHV
AVEATESVGG LSRESRLLAQ QTGETMRQVY QDISDAKKVV AILAERSDSI NEVVNSISGI
AEQTNLLALN AAIESARAGE AGRGFAVVAD EVRALAIRTQ NATQSIHNMT EELKKNTLDV
TNTIDKGTAV AQEGVDSVNK VAQKMGDIEA AIKRVVEMTA QINVSSEEQA SVARDLNEKM
QDVDSLSINS IERAENIVVN ISHIEEEAYE QGNLAERMKQ
|
|---|
| |