| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3404 |
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| Symbol | |
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| ID | 1171080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3542358 |
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| End bp | 3543926 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345206 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_718957 |
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| Protein GI | 24374914 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAC ATTCAAAAAA AGGTGAAAAA CACCTATCTG AAAACGCGAT ACTTCTCTCT
ACGACCGATC TGAAAGGAAA TATTAAGTAC GTTAATCAAA CCTTTTCGCA GATAAGTGAA
TATAGCGTTG CTGAGTTGCA AGGGAGTCCA CACAATATCG TGCGCCATGA GGATATGCCT
GCCGCTGCCT TTAAAATGCT TTGGGATAGA ATTAAAACTG GCAAACCTTG GATGGGGATC
GTCAAAAATA AGACCAAAAA TGGTAGTTAC TATTGGGTAA ATGCCTATGT CGCGCCTGTG
TATGAAGATG GTAAAATCCA TGAATATCAA TCAGTTCGTC GTCAGGCTAC TCCAGAGCAA
ATCAGGGCAG CAGAAGAGGT TTATCTGGCA ATCAATCAAG GTAAACAAGC TAAGACATTA
AAAAAAGACC GATTAGGATT TAGGGGGAAA ATCCTCACCG CTATGTTTGT TGCTATTGCT
GCAACGGCAT CTCTGGCGTG TTATTCCCCC CTCTTAGCGG CTCTTGTGGG TGGTTTAATC
GCTTGGTTTT TGTGGTACAA GCTGATGCAG CCTTTGCAGG CATTGGTTAG CGTTGCCACT
AATATTATTG ATGATCCTGT GGCTATGGGG ATTTATACCG GCAGGCAGGA TGAAATCGGT
AAAATTGATC TTGCTCTACG ATTTTTAATC TCTGAAATCG GTGGTGTCGT GGGCCGTATG
GCGGATTCAG CCAGTGAAAT TCAAGAGCAG AGTGTGAATC TTAAACAAAC CATCACCAAT
ACCTGGGAAC ATGCCGATAG TCAGAGCGCA CAAACCACAC AGGCTGCGAC GGCGATGGAG
CAAATGAGTG CCAGTTTTGC TGAGGTGACG GATAATATCC ACCGCACTGC ATCTGAAATG
GTCTCCAGCC ATGAAGCAGC GCAGCGCGGC CATTCACGGC TTGAAACTGT CATTGAGGCG
ATTCACCAAC TGAGTGTACA GGTGAGCCAT TTTTCCGATG TGGTGCAAAC GATAGAGCAA
GATAGCCAAG CAATTCATCA AGTATTAGAG GTTATCCGCG CTATTGCCGA CCAGACTAAC
CTGTTGGCGC TCAATGCGGC GATTGAAGCG GCGCGGGCAG GGGAAAGTGG CCGGGGTTTT
GCCGTGGTTG CCGACGAGGT GAGACAATTA TCGAGCCGCA CCAGCCAATC GACATCGCAA
ATTGAGCTGA TTGTGAGTCG CTTTAGAGAC AGTACCCAAA GAGCGACCTC AACGATGACG
GCTGGGCAAG AACAGGTTAA ACGCTCCGTT TCCTTAGCGC AGGATGCCAG CGTTGCTTTT
GGTGAGCTAT TGTCCTCTAT CTCCCGAATC AATTCCTTAA GTGATGATAA TGCGGCGGCC
ATGACCCAAC AGACAACTGT GGCGGCAGAG ATCAGCCGTG CAATCCATGT GATCAGCGAT
TTAGCTCAAC AGAGTCTACA GCAGACTCAA GATGCCGCGG CAAGGGGTGA GCAGGTATCA
CGTTTGTCTA CCAAAACTCA TCACCTCTCG CAGCAGTTCT GGCAGCAGAG CGTACAGCGT
AAGTATTAA
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| Protein sequence | MQTHSKKGEK HLSENAILLS TTDLKGNIKY VNQTFSQISE YSVAELQGSP HNIVRHEDMP
AAAFKMLWDR IKTGKPWMGI VKNKTKNGSY YWVNAYVAPV YEDGKIHEYQ SVRRQATPEQ
IRAAEEVYLA INQGKQAKTL KKDRLGFRGK ILTAMFVAIA ATASLACYSP LLAALVGGLI
AWFLWYKLMQ PLQALVSVAT NIIDDPVAMG IYTGRQDEIG KIDLALRFLI SEIGGVVGRM
ADSASEIQEQ SVNLKQTITN TWEHADSQSA QTTQAATAME QMSASFAEVT DNIHRTASEM
VSSHEAAQRG HSRLETVIEA IHQLSVQVSH FSDVVQTIEQ DSQAIHQVLE VIRAIADQTN
LLALNAAIEA ARAGESGRGF AVVADEVRQL SSRTSQSTSQ IELIVSRFRD STQRATSTMT
AGQEQVKRSV SLAQDASVAF GELLSSISRI NSLSDDNAAA MTQQTTVAAE ISRAIHVISD
LAQQSLQQTQ DAAARGEQVS RLSTKTHHLS QQFWQQSVQR KY
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