| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4927 |
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| Symbol | |
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| ID | 3520146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5217497 |
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| End bp | 5219032 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287366 |
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| Product | methyl-accepting chemotaxis protein/sensory box protein |
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| Protein accession | YP_271566 |
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| Protein GI | 71279686 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAA GAAACCAACC GCTCATTAAT GAGGAAGTTA ATTTTCAAAG CGGTGTTGAA
TTAATTTCGA CTACAGATAA AAACGGCGTG ATTACCTATG CAAACCCAGA ATTCTGTCGA
ATTGCTGGCT TCTCTCTTGA TGAACTTATC GGACAACATC ATAATGTTGT AAGACATCCC
GATATGCCAT CTGCTGCATT TAAAGATTTG TGGAAAAACT TACAGTCAGG TTTACCATGG
CGTGGCGTTG TTAAAAACCG TTGTAAAGAT GGTCGATATT ATTGGGTAGA CGCCTTTGTC
ACGCCTATTT TTGAATTTGG TCAGCTCGTC GGTTATCAAT CGGTTAGAAC ACGTTTAGAT
GATGCAACCA AGAAAAATGC TATTTCGTCT TATCAAGCAT TACAAAAGGG TAAATCATTA
ACGAAATGGT ATCAAAACAC CACCATTAAA AACCTAGTCT ATTGGTCAGC AAGTATTACC
ACGCTCATAA GCGCCATGTA TTACCCCTAT ATGATGTTCT TACTGCCTGT ACTGCCCTTC
ATAACTTATA AAAATGAAAT AATAGACACG CCAAAATACC TTAAAGATCT AGTACGTGAT
TATGACAGCG TTTCACGTTT AATTTATTGT GGCACTAAAC CTCAAGGCAT TGCAGATTTT
CATTTAAAGG TTGCTGAAGG TAAGATAAAA ACAATTTTGG GTCGCATCAT TGATAGCAGT
AATTTACTAA GCTCGGGTGC TACTAATCTT GAGCAAGCAG CACAAATAGC TAAAGAAGGT
GCAGAGCAAG AAACGACAGA GCTACATCAG GTATCGACAG CCGTTGAAGA AATGGTTGCC
ACCATCGATG AAGTTGCGAA AAATACCACT CTCACCTCCC AAAAAGTCAA TCAAGCACAT
TCAGATTGTC AAATTGCTAC AGAAGCGATG CACCTCACCA TGGAAAAAGT GAACCTATTA
GCTCAGGACG TGGCTGACTC AGCGTCATCA GCAACAGAGC TGGCGAGTGA AGTAGAAAAA
GTTGGTAGCA TCATGCATGA AATTCAAGGT ATTGCAGACC AAACAAATTT ATTAGCGTTA
AATGCTGCGA TCGAAGCGGC AAGAGCGGGT GAGCATGGCC GCGGTTTCTC CGTTGTGGCC
GATGAAGTAA GGGCATTATC AAGCAGAACC CACGCAGCAA CAGAACAAAT ACAAACCTCA
ATATCAGAAA TGCAAAGTAC ATTATTGTCT TGGGTGCAAA CAATGACCAA AGGTAAAGAA
TCTGCTGAAA GTTGTGTTGA AAAAGCTACA GAAGCTCATA ACGTTGTTGA TAAGGTCTAT
TCATCAATCA CTGACATTTC TGACTTAGCT ATTCAAATAT CAACCGCATC AGAAGAGCAG
AGCATGGTAT CGCAAGAAAT CAGCCGCAAT ATTATGAACA TCAGTGATGC TTCCCAAAAT
AATCTCCATC AAGCCAATAC CGTCGAAAGC GAAACTATAA ACATTAAAAC AAGAGCCAAC
GCCCTTGGGG CTTTAGGCCA AGCTTTTAAT GGATAA
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| Protein sequence | MTKRNQPLIN EEVNFQSGVE LISTTDKNGV ITYANPEFCR IAGFSLDELI GQHHNVVRHP
DMPSAAFKDL WKNLQSGLPW RGVVKNRCKD GRYYWVDAFV TPIFEFGQLV GYQSVRTRLD
DATKKNAISS YQALQKGKSL TKWYQNTTIK NLVYWSASIT TLISAMYYPY MMFLLPVLPF
ITYKNEIIDT PKYLKDLVRD YDSVSRLIYC GTKPQGIADF HLKVAEGKIK TILGRIIDSS
NLLSSGATNL EQAAQIAKEG AEQETTELHQ VSTAVEEMVA TIDEVAKNTT LTSQKVNQAH
SDCQIATEAM HLTMEKVNLL AQDVADSASS ATELASEVEK VGSIMHEIQG IADQTNLLAL
NAAIEAARAG EHGRGFSVVA DEVRALSSRT HAATEQIQTS ISEMQSTLLS WVQTMTKGKE
SAESCVEKAT EAHNVVDKVY SSITDISDLA IQISTASEEQ SMVSQEISRN IMNISDASQN
NLHQANTVES ETINIKTRAN ALGALGQAFN G
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