| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0602 |
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| Symbol | |
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| ID | 5134945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 655093 |
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| End bp | 656703 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530924 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001215441 |
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| Protein GI | 147672450 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATACAT TTGCGCTCAT AAAAATAACC GAAGAACAAC AAGCCGAAAT GTCAGCCTAT
ACTCCCTCTG CTCAACAAGA AGTCCTTGTC GGCGACCATG ACCAATTGGT ATCAACGACG
GATTTAAAAG GTGTCATCAC CTACTGTAAT GATACATTTT GTCGTATTGC TGGGTTCCAA
GCCGATGAGC TGCTAGGAAA AAATCACAAT ATCGTTCGCC ATGCTTCGAT GCCGAAAGCG
GCGTTTGCCG ATATGTGGCA CCACCTTAAG CAAGGGCATG CTTGGCGCGG AATCGTGAAG
AATCGCACTA AATCCGGCGG GTTTTACTGG GTTGACGCCT ATGTAACGCC GATTTATCAA
CAAGGCCAAC TTACAGGTTA TCAATCGGTT CGGGTAAAAG CTGAGCGAAA GTGGGTAGAG
ATTGCCACCA AAGCCTACCA AGCGTTATTA GTGGCTGAAA AGGCCGGTAA AAAAATCCAA
TTTAAGCTGC ATACTTCGCT GCGTTACGCC TTGTTGCTCG GTGCATTGAT GTCACCAGCA
TTGGCACATG GGTTTCAAGC TCCTGAACAG TGGCAATGGT TAGCCAGTCT TTTACCAGCG
GGAGTATTAG GTTTGTTGTT TCGGCAAGAG CTAGTGCGTA CCCCGCAACA GCTCAAACAG
TGGCAAAACG AGTATGACAG TATCAGCCGT TTGATCTATT CGGGCGCTGA TGCTTTTTCT
GTTGCCGACT ACCATCTAAA AATGGCTTCC GCTCGGATCC GTACCATTCT CGGTAGAATG
ATGGACTCGG CGCGTCCATT GGGTGAACTG GCCAATCAGC TGCATTTGAC GACGCAAGAA
GTGCATCAAG CGTTGGCGGC ACAAAACAGC AACATCCAAG CCGTAACGCA AGCCACCGAT
GCTGTCGAGA GCGCCGCTGA GCGGGTTTCG AGCCATACTC ACTCGGCTCA TCAATTGATT
GATCAAGTGC AAAATCATTG TGCCGAGACC AAACACAGCA TCAATGTCAC CCATCAGAAT
TTACAGCGAC TGGCTACGCA AGCTGAGAGT GCTGCCTTGA CGACACTAAA ACTGAGCGAT
CAAGCGCAGC AGGTCGGGCA ATTAATGACT GAAATTGGCG GGATTGCTGA GCAAACCAAT
TTACTGGCGC TGAATGCTGC GATTGAAGCC GCTAGAGCGG GTGAACAAGG TCGAGGGTTC
GCCGTTGTGG CGGATGAAGT GCGCGCATTA TCGGCTCGTA CTCAGCGTGC CACACAGCAG
ATCCAAACCA GCATTGATAC TATGTTGTCC ACTATTGAAG CGTGGCGAGG GGATATCACT
GCAAGTCGTG ATCAAACCGA GCAGTGCGCT CAAGATGCGA ATACCACGCT GCAGCAGTTG
CAGGATGTAG AATGCGTAAT GAGTGACATG CTGCGAGTTA TCGGTGAGGT CGCGAGTGCT
GCGCAACATC AACGTGAGCT CACCTGCGAG GTTAACCAAC ATATCCACTC TATCGCCAGT
GTGGCAACGC AAAATTCCGC GGCCACCCAT ACCGTAGAAC AGTTAGCGAT GGCGATGAGC
GGTAAAGTGG CAGAATTTGG AGCGCTTTCG AAGCAGTTTG CACAAAAATA G
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| Protein sequence | MYTFALIKIT EEQQAEMSAY TPSAQQEVLV GDHDQLVSTT DLKGVITYCN DTFCRIAGFQ
ADELLGKNHN IVRHASMPKA AFADMWHHLK QGHAWRGIVK NRTKSGGFYW VDAYVTPIYQ
QGQLTGYQSV RVKAERKWVE IATKAYQALL VAEKAGKKIQ FKLHTSLRYA LLLGALMSPA
LAHGFQAPEQ WQWLASLLPA GVLGLLFRQE LVRTPQQLKQ WQNEYDSISR LIYSGADAFS
VADYHLKMAS ARIRTILGRM MDSARPLGEL ANQLHLTTQE VHQALAAQNS NIQAVTQATD
AVESAAERVS SHTHSAHQLI DQVQNHCAET KHSINVTHQN LQRLATQAES AALTTLKLSD
QAQQVGQLMT EIGGIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRAL SARTQRATQQ
IQTSIDTMLS TIEAWRGDIT ASRDQTEQCA QDANTTLQQL QDVECVMSDM LRVIGEVASA
AQHQRELTCE VNQHIHSIAS VATQNSAATH TVEQLAMAMS GKVAEFGALS KQFAQK
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