More than 300 homologs were found in PanDaTox collection
for query gene PputW619_3813 on replicon NC_010501
Organism: Pseudomonas putida W619



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4521  aerotaxis receptor, putative  92.13 
 
 
521 aa  978    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  69.29 
 
 
521 aa  720    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  68.52 
 
 
521 aa  708    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  93.28 
 
 
521 aa  989    Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  92.13 
 
 
534 aa  977    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  70.72 
 
 
521 aa  729    Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
521 aa  1060    Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
521 aa  492  9.999999999999999e-139  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  50.66 
 
 
521 aa  491  1e-137  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  50.28 
 
 
521 aa  490  1e-137  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50 
 
 
521 aa  483  1e-135  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  49.25 
 
 
521 aa  480  1e-134  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.43 
 
 
521 aa  479  1e-134  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_007005  Psyr_3406  PAS  50.09 
 
 
521 aa  479  1e-134  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
521 aa  481  1e-134  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  49.72 
 
 
521 aa  470  1.0000000000000001e-131  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  49.06 
 
 
521 aa  468  9.999999999999999e-131  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
522 aa  462  1e-129  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.34 
 
 
521 aa  461  9.999999999999999e-129  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  50.74 
 
 
521 aa  457  1e-127  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  50.56 
 
 
521 aa  452  1.0000000000000001e-126  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  47.78 
 
 
524 aa  451  1e-125  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  43.7 
 
 
515 aa  428  1e-118  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.15 
 
 
527 aa  399  9.999999999999999e-111  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.15 
 
 
523 aa  392  1e-108  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  43.1 
 
 
527 aa  386  1e-106  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  48.4 
 
 
419 aa  375  1e-103  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  39.16 
 
 
518 aa  366  1e-100  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.77 
 
 
521 aa  353  4e-96  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  41.54 
 
 
529 aa  347  2e-94  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.46 
 
 
524 aa  342  1e-92  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
524 aa  341  2e-92  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  41.52 
 
 
531 aa  340  2.9999999999999998e-92  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.79 
 
 
524 aa  335  7.999999999999999e-91  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.79 
 
 
524 aa  335  1e-90  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.65 
 
 
526 aa  335  1e-90  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
524 aa  330  3e-89  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
524 aa  330  5.0000000000000004e-89  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.07 
 
 
524 aa  330  5.0000000000000004e-89  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.24 
 
 
524 aa  329  6e-89  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  38.87 
 
 
524 aa  328  1.0000000000000001e-88  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  37.63 
 
 
524 aa  327  2.0000000000000001e-88  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  35.63 
 
 
524 aa  325  1e-87  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.52 
 
 
523 aa  318  2e-85  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
520 aa  314  1.9999999999999998e-84  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  35.73 
 
 
513 aa  303  4.0000000000000003e-81  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  36.59 
 
 
522 aa  299  1e-79  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  37.98 
 
 
517 aa  296  6e-79  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  36.8 
 
 
532 aa  295  2e-78  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  36.45 
 
 
522 aa  295  2e-78  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.34 
 
 
516 aa  295  2e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.45 
 
 
522 aa  294  3e-78  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  36.26 
 
 
522 aa  293  4e-78  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
538 aa  293  6e-78  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.96 
 
 
522 aa  292  1e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  36.06 
 
 
522 aa  290  6e-77  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.77 
 
 
522 aa  288  1e-76  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  35.93 
 
 
516 aa  287  2.9999999999999996e-76  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.58 
 
 
522 aa  286  5e-76  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  34.37 
 
 
518 aa  286  5.999999999999999e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  36.35 
 
 
520 aa  283  5.000000000000001e-75  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  33.4 
 
 
511 aa  283  6.000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
532 aa  282  1e-74  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.64 
 
 
556 aa  278  2e-73  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.28 
 
 
575 aa  276  6e-73  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.47 
 
 
522 aa  276  9e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.27 
 
 
522 aa  276  9e-73  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.27 
 
 
522 aa  275  1.0000000000000001e-72  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.55 
 
 
514 aa  272  1e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
532 aa  271  2.9999999999999997e-71  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  36.56 
 
 
565 aa  269  8e-71  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
522 aa  266  8e-70  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.26 
 
 
550 aa  266  8.999999999999999e-70  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.37 
 
 
517 aa  266  1e-69  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  35.46 
 
 
523 aa  263  4e-69  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_007298  Daro_0674  PAS  33.81 
 
 
544 aa  262  1e-68  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.02 
 
 
522 aa  261  2e-68  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.6 
 
 
519 aa  261  2e-68  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
522 aa  261  2e-68  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
533 aa  260  3e-68  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.85 
 
 
520 aa  261  3e-68  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  35.4 
 
 
549 aa  260  5.0000000000000005e-68  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.76 
 
 
511 aa  259  8e-68  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
522 aa  259  9e-68  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.79 
 
 
514 aa  259  1e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.97 
 
 
598 aa  257  3e-67  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.36 
 
 
543 aa  256  6e-67  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.12 
 
 
566 aa  256  7e-67  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  35.41 
 
 
514 aa  254  4.0000000000000004e-66  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.27 
 
 
566 aa  254  4.0000000000000004e-66  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  33.21 
 
 
583 aa  254  4.0000000000000004e-66  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0839  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.41 
 
 
511 aa  253  8.000000000000001e-66  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.73 
 
 
551 aa  252  9.000000000000001e-66  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  34.82 
 
 
520 aa  252  9.000000000000001e-66  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_012880  Dd703_3127  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.65 
 
 
515 aa  252  1e-65  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.34 
 
 
579 aa  251  2e-65  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1726  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.2 
 
 
526 aa  250  3e-65  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2845  methyl-accepting chemotaxis protein  34.2 
 
 
526 aa  251  3e-65  Yersinia pestis Angola  Bacteria  normal  normal  0.208852 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.27 
 
 
524 aa  250  5e-65  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1618  methyl-accepting chemotaxis protein  34.2 
 
 
526 aa  250  5e-65  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>