| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3240 |
|---|
| Symbol | |
|---|
| ID | 5755036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 3811916 |
|---|
| End bp | 3813517 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641289565 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001555662 |
|---|
| Protein GI | 160876346 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATA TCGGCCCTGA ATGGACACAC AAAATGAGTC AGAGTAACGC GTCTGCCAAC
AGAACACTGA ATACACAGAG ATCAGATCAA GAAATTCGCT TAACACCACA GGACGAACTC
ATTTCCACCA CCGACACTCG CGGTGTTATC ACTTACGTTA ATGCCCGTTT TGCCGAAGTC
TCAGGCTATA GCGCCCAAGA GTTAGTCGGC AGTGCCCACA ATATGGTTCG TCATCCCGAT
ATGCCGAGCG CCGCCTTTAA AGAAATGTGG GAAAAGCTTA AGTCGGGCCA ATCTTGGCGC
GGCATAGTGA AAAACCGCTG CAAAAATGGT GGCTTCTATT GGGTCGATGC CTTTGTCTCG
CCATTGTTTG AAAACGGCAC CATTATCGGT TATCAATCGG TGCGTATTCA GCCTCAGGCC
GCCTACGTCA GCAAAGCAAA TGAGATATAC CAAAGACTTA AACTGGATAA ATCCATTTCT
AAGCCCTTAA GCTTAATGCA GAAACGTATC CTCTCGGCGG TTGTCGCCTC GACCGGCCTG
CTGATCGCAG GCTACTTTTG GGGCTGGGGC GTGATTATCG CTGGGGCGGT TTTGATGAGT
TTAAACTTGG CTATTTTCTA CGATGAGGCC TTTCGCATTC CCGCTAAACT GATTGAAATG
CAAACCAAAT ACGACTCTAT CAGTCGTTAC ATCTACTCGG GTGCCGATAC GTCTTCTATC
CTCGACTTCC AGCTCATCAT GCTGCAGGCC AAAATGAATG GCGTACTGGG GCGCACTCAA
GATCAAGCCA ATCAATTGCA CGCAATTGCC GATCAATTAG TGGTCGCGAC CGAGCAAACC
TATGTCAGCC TAGATCAAGA GAAAAGTCAG TTAGAACAGC TCTCTGGCGC GATGGAAGAA
ATGAGTTCAA CCATCACAGA AGTGGCGCAG AATACCCATC TCACGTCCAC CAGCATCAAT
ACCGCCTACG ATCTCTGCCT TAAAAGCAGC GCCAATATGA AGGCCAACAC TCAAAAAGTG
GAACAACTGG CCAAGTCTGT TGCCGATGCC GCTAACAATG CCCATCAATT GAATAAAGAA
GCCGAGCAAG TTGCTAATGC GATGGGCGAA ATTGACTCCA TCGCCGAGCA AACCAATCTT
CTCGCCCTCA ATGCGGCCAT TGAAGCTGCC CGTGCGGGTG AACAAGGCCG TGGGTTTGCC
GTGGTCGCCG ATGAAGTGCG CGCGCTGTCG AGCCGAACCC AACTGTCGAC CAACAGTATT
TCAAAAAGTG TCGATAAGAT GTTCACTATG CTCAACGCAT GGGCCAAAGA AATGGAACAA
AGCCGCCAAC ACGCGGAGCG CTGCGCTAGC GACATCCAAC TGTCCGCCGA CAATGTGAAT
ACCCTTTACC AAGAAGTGAG TGATATCCAC ACCTTTGCCC AGCAAAATGC GGTCGCAGCG
GATCAACAGC GCCAAGTGGT CAACGAGATT GCCAGCAACA TACACTCCAT CACCCATTCA
AGCGCAGAGA ACTTGGCCGC GACCCATCTG ATTGGTGATG CCGCCCATCT GCTTAAGCAT
AATGCCGAGA AAGCCCTCGG CTTGAGACGC ACTTTCGGTT AG
|
|---|
| Protein sequence | MNHIGPEWTH KMSQSNASAN RTLNTQRSDQ EIRLTPQDEL ISTTDTRGVI TYVNARFAEV
SGYSAQELVG SAHNMVRHPD MPSAAFKEMW EKLKSGQSWR GIVKNRCKNG GFYWVDAFVS
PLFENGTIIG YQSVRIQPQA AYVSKANEIY QRLKLDKSIS KPLSLMQKRI LSAVVASTGL
LIAGYFWGWG VIIAGAVLMS LNLAIFYDEA FRIPAKLIEM QTKYDSISRY IYSGADTSSI
LDFQLIMLQA KMNGVLGRTQ DQANQLHAIA DQLVVATEQT YVSLDQEKSQ LEQLSGAMEE
MSSTITEVAQ NTHLTSTSIN TAYDLCLKSS ANMKANTQKV EQLAKSVADA ANNAHQLNKE
AEQVANAMGE IDSIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRALS SRTQLSTNSI
SKSVDKMFTM LNAWAKEMEQ SRQHAERCAS DIQLSADNVN TLYQEVSDIH TFAQQNAVAA
DQQRQVVNEI ASNIHSITHS SAENLAATHL IGDAAHLLKH NAEKALGLRR TFG
|
|---|
| |