More than 300 homologs were found in PanDaTox collection
for query gene Pmen_1800 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  70.72 
 
 
521 aa  729    Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  70.34 
 
 
521 aa  725    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  70.15 
 
 
521 aa  724    Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  70.34 
 
 
534 aa  723    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  71.21 
 
 
521 aa  738    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  71.65 
 
 
521 aa  738    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  100 
 
 
521 aa  1061    Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  52 
 
 
521 aa  520  1e-146  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  52.11 
 
 
521 aa  519  1e-146  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.25 
 
 
521 aa  516  1.0000000000000001e-145  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  50.86 
 
 
521 aa  516  1.0000000000000001e-145  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  50.86 
 
 
521 aa  514  1e-144  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.06 
 
 
521 aa  514  1e-144  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  50.86 
 
 
521 aa  509  1e-143  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  50.48 
 
 
521 aa  508  9.999999999999999e-143  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  50 
 
 
521 aa  490  1e-137  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  50.1 
 
 
521 aa  488  1e-136  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.62 
 
 
521 aa  466  9.999999999999999e-131  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  51.44 
 
 
521 aa  463  1e-129  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  47.73 
 
 
522 aa  462  1e-129  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  51.43 
 
 
521 aa  461  9.999999999999999e-129  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  48.28 
 
 
524 aa  451  1e-125  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
515 aa  437  1e-121  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  43.85 
 
 
527 aa  404  1e-111  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.57 
 
 
527 aa  403  1e-111  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.18 
 
 
523 aa  385  1e-105  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
419 aa  375  1e-102  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  42.8 
 
 
529 aa  362  1e-98  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.2 
 
 
526 aa  352  1e-95  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.57 
 
 
521 aa  348  1e-94  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  37.9 
 
 
518 aa  346  6e-94  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.12 
 
 
524 aa  343  4e-93  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.12 
 
 
524 aa  343  5.999999999999999e-93  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
524 aa  340  2.9999999999999998e-92  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
524 aa  338  1.9999999999999998e-91  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
524 aa  337  1.9999999999999998e-91  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.56 
 
 
524 aa  338  1.9999999999999998e-91  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.74 
 
 
524 aa  338  1.9999999999999998e-91  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
524 aa  338  1.9999999999999998e-91  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  41.68 
 
 
531 aa  330  5.0000000000000004e-89  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  38.68 
 
 
524 aa  329  7e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
520 aa  324  3e-87  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.29 
 
 
524 aa  319  7e-86  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  37.03 
 
 
511 aa  315  9.999999999999999e-85  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.45 
 
 
524 aa  311  2e-83  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  37.68 
 
 
516 aa  305  2.0000000000000002e-81  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  37.38 
 
 
517 aa  301  2e-80  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
532 aa  300  3e-80  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  35.99 
 
 
513 aa  298  1e-79  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.02 
 
 
522 aa  291  1e-77  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.62 
 
 
522 aa  291  1e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.23 
 
 
514 aa  291  3e-77  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.68 
 
 
516 aa  290  5.0000000000000004e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.42 
 
 
522 aa  289  8e-77  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  37.13 
 
 
520 aa  288  1e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  37.16 
 
 
522 aa  288  1e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
538 aa  286  8e-76  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  33.96 
 
 
518 aa  284  2.0000000000000002e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
522 aa  285  2.0000000000000002e-75  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
522 aa  284  3.0000000000000004e-75  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.8 
 
 
522 aa  283  6.000000000000001e-75  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.05 
 
 
511 aa  282  9e-75  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  35.17 
 
 
522 aa  281  2e-74  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
522 aa  281  2e-74  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  36.45 
 
 
523 aa  280  3e-74  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.74 
 
 
575 aa  274  2.0000000000000002e-72  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.88 
 
 
522 aa  274  3e-72  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.14 
 
 
514 aa  273  5.000000000000001e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.77 
 
 
522 aa  273  5.000000000000001e-72  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
532 aa  273  6e-72  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.49 
 
 
522 aa  270  4e-71  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  36.17 
 
 
549 aa  270  5e-71  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
522 aa  268  2e-70  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.45 
 
 
520 aa  268  2e-70  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.78 
 
 
522 aa  267  4e-70  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
533 aa  266  8.999999999999999e-70  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  34.65 
 
 
522 aa  266  8.999999999999999e-70  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.47 
 
 
550 aa  265  1e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.45 
 
 
524 aa  265  1e-69  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  33.7 
 
 
514 aa  265  2e-69  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_008391  Bamb_4714  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.91 
 
 
535 aa  261  2e-68  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.15 
 
 
598 aa  261  2e-68  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  34.65 
 
 
580 aa  260  4e-68  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  34.65 
 
 
580 aa  260  4e-68  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  34.65 
 
 
580 aa  260  4e-68  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  34.65 
 
 
580 aa  260  4e-68  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  34.14 
 
 
583 aa  260  5.0000000000000005e-68  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.82 
 
 
514 aa  259  9e-68  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5243  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.54 
 
 
514 aa  259  9e-68  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0641076  normal 
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.31 
 
 
566 aa  259  1e-67  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  33.77 
 
 
623 aa  257  4e-67  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.75 
 
 
517 aa  257  4e-67  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.17 
 
 
514 aa  256  5e-67  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  34.27 
 
 
583 aa  257  5e-67  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  33.77 
 
 
669 aa  256  5e-67  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.63 
 
 
514 aa  256  8e-67  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  35.63 
 
 
514 aa  256  9e-67  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.58 
 
 
514 aa  255  1.0000000000000001e-66  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.39 
 
 
556 aa  255  1.0000000000000001e-66  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.57 
 
 
561 aa  255  1.0000000000000001e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
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