| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1648 |
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| Symbol | aer-1 |
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| ID | 1183285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1806405 |
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| End bp | 1807970 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393020 |
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| Product | aerotaxis receptor |
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| Protein accession | NP_791473 |
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| Protein GI | 28868854 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCA ACATGCCTAT CACCCAGACT GAACGGACTT TTCCGGCATC TGAACGCCTC
ATCTCCACCA CCGACCTCAA CAGCCAGATC ACCTATTGCA ACGACGCCTT CGTCACGTTG
AGTGGCTTCA CCCGCGAAGA GCTGATCGGC CAGCCGCACA ACCTGGTGCG CCACCCGGAC
ATGCCCGCCG CGGTCTTTGC TCATATGTGG GAAACCATAA AACAGGGCAA ACCCTGGATG
GGCGTGGTCA AGAACCGCTC CAAACAGGGC GATTATTATT GGGTCAGCGC CTACGTCACT
GCTGTCTACG AAAACGGTCG GATCGTCGGC TACGAATCGA TGCGCTCGCT GCCGACCCGC
GATCAAGTGC GCCGCGCCGA TGCCTTGTAT GCACGGCTGC GTGCCGGTAA ATCGTCGGTC
TCGGCGACCA GCACCGCTGC CTATCACCTG GTTCGCCAAC TGCCGATGAT CCTCTGCGCC
CTGGCACTGG CTGCCGGCGT CTACCTGCTG GACGATCTGC CTTCGATCAT CATGATTCCG
ATCGTGATGG TTGTGCTGGG CGGCTTTCTG GAAATGCGCC AGCGCCGCAG CATTCGCAGC
ACCCTTGAAG AACACCCCAA AGCGTTCACC AGTTCACTGG TTGCGCTGAC CTACAGCGAC
AACCGTGGCC CGCAGGCGCA GCTCGATCTG GCCATGCTCA GCGAAGAAGC CCGCCTGCAA
ACGGCCCTGA CGCGCCTGGC CGATACTGGC GAGAGCGTGC GCCAGCATGC CGGTCGGTCG
GCGCAATTGT CGCTGCGCCA GGCCGAGTCG CTTGATCAGC AACGCAGCGA GGCCGATCAG
TCGGCCACGG CGATCAACCA GATGGCGGCG ACCATTCAGG AAGTGACGCA CAACGTACAG
AGCACTGCCC ATGCTGCCGA AGAAGCCGAC AAGCTGGCGC AGCAGGGGCG TGGTCTGGCT
GATGACAGCC TGTTGGCGAT TCGGCACATG GCCAACTCGG TTACTGACAT CGGTCAGGCC
GTGGGCGAAC TGGCCGATGC CACGCAGTCG ATTGGCAGCG TGGTCGATGT GATTACCTCG
ATTGCCCAGC AAACCAACCT GTTGGCGCTC AACGCCGCCA TCGAAGCGGC GCGTGCCGGT
GAGCAAGGGC GTGGTTTTGC GGTGGTCGCC GACGAAGTTC GTTCGCTGGC TTCACGCACC
CAGACCTCGA CCGAACAGAT CCAGCAAATC ATCACCTCCC TGCGCGACGG CGCCGCCCGT
GCGGTCCTGA CTGCCAACAA AGGCGAGCAG ATCTCCAAGG AAAGCGTCGC CAGTGTCGAA
GCCGTGCAGA AAGCCCTGGA CGGTATCAGC CAATCGGTAA CGCGCATCAC GGGCATGAGC
CAGCAAATGG CCTCGGCGTC GGAAGAGCAA AGCCACGTCG CGGAAAACAT CAGCCAGCAA
ATCACCCGCA TCGCCCAACT CTGCGACCAA AGCGCCGGCC AGGCACAGCA AGGCTCGCAG
ATCAGCACCG AACTGGAAGA AATGGCGCAA TACCTGCACA GCCTGGCAGA GCGCTTCAGC
CGGTAA
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| Protein sequence | MRVNMPITQT ERTFPASERL ISTTDLNSQI TYCNDAFVTL SGFTREELIG QPHNLVRHPD
MPAAVFAHMW ETIKQGKPWM GVVKNRSKQG DYYWVSAYVT AVYENGRIVG YESMRSLPTR
DQVRRADALY ARLRAGKSSV SATSTAAYHL VRQLPMILCA LALAAGVYLL DDLPSIIMIP
IVMVVLGGFL EMRQRRSIRS TLEEHPKAFT SSLVALTYSD NRGPQAQLDL AMLSEEARLQ
TALTRLADTG ESVRQHAGRS AQLSLRQAES LDQQRSEADQ SATAINQMAA TIQEVTHNVQ
STAHAAEEAD KLAQQGRGLA DDSLLAIRHM ANSVTDIGQA VGELADATQS IGSVVDVITS
IAQQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRSLASRT QTSTEQIQQI ITSLRDGAAR
AVLTANKGEQ ISKESVASVE AVQKALDGIS QSVTRITGMS QQMASASEEQ SHVAENISQQ
ITRIAQLCDQ SAGQAQQGSQ ISTELEEMAQ YLHSLAERFS R
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