More than 300 homologs were found in PanDaTox collection
for query gene Rmet_3682 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  79.85 
 
 
551 aa  837    Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
552 aa  1110    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.58 
 
 
598 aa  518  1.0000000000000001e-145  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  49.81 
 
 
514 aa  493  9.999999999999999e-139  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_007511  Bcep18194_B0267  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
514 aa  491  1e-137  Burkholderia sp. 383  Bacteria  normal  normal  0.715012 
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.37 
 
 
529 aa  488  1e-136  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.37 
 
 
529 aa  488  1e-136  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_008391  Bamb_4714  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.62 
 
 
535 aa  488  1e-136  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.19 
 
 
514 aa  487  1e-136  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  49.72 
 
 
580 aa  484  1e-135  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4907  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.29 
 
 
514 aa  483  1e-135  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  49.72 
 
 
580 aa  484  1e-135  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  49.72 
 
 
580 aa  484  1e-135  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_007511  Bcep18194_B0268  methyl-accepting chemotaxis sensory transducer  49.43 
 
 
514 aa  483  1e-135  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_010552  BamMC406_5243  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.62 
 
 
514 aa  484  1e-135  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0641076  normal 
 
 
-
 
NC_010552  BamMC406_5244  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.38 
 
 
514 aa  484  1e-135  Burkholderia ambifaria MC40-6  Bacteria  normal  0.362794  normal 
 
 
-
 
NC_008543  Bcen2424_5363  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.29 
 
 
514 aa  482  1e-135  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0430629  normal 
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  49.72 
 
 
580 aa  484  1e-135  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  49.25 
 
 
583 aa  481  1e-134  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3003  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.29 
 
 
535 aa  481  1e-134  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  48.01 
 
 
557 aa  473  1e-132  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  49.63 
 
 
623 aa  473  1e-132  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  50 
 
 
514 aa  473  1e-132  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  49.63 
 
 
583 aa  474  1e-132  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.81 
 
 
556 aa  473  1e-132  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  49.63 
 
 
669 aa  473  1e-132  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.1 
 
 
514 aa  475  1e-132  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.71 
 
 
514 aa  471  1.0000000000000001e-131  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.9 
 
 
514 aa  471  1.0000000000000001e-131  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0801  methyl-accepting chemotaxis protein  50.57 
 
 
514 aa  463  1e-129  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1814  aerotaxis receptor  50.57 
 
 
514 aa  463  1e-129  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0387  aerotaxis sensor receptor  50.57 
 
 
514 aa  463  1e-129  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0904499  n/a   
 
 
-
 
NC_010086  Bmul_3362  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.69 
 
 
514 aa  463  1e-129  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.234118 
 
 
-
 
NC_008835  BMA10229_2118  methyl-accepting chemotaxis protein  50.57 
 
 
514 aa  463  1e-129  Burkholderia mallei NCTC 10229  Bacteria  normal  0.333375  n/a   
 
 
-
 
NC_009075  BURPS668_A0485  aerotaxis sensor receptor  50.57 
 
 
514 aa  463  1e-129  Burkholderia pseudomallei 668  Bacteria  normal  0.537813  n/a   
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  52.79 
 
 
529 aa  461  9.999999999999999e-129  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.28 
 
 
566 aa  460  9.999999999999999e-129  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_24380  aerotaxis receptor Aer  47.92 
 
 
567 aa  455  1e-127  Azotobacter vinelandii DJ  Bacteria  normal  0.0650163  n/a   
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48 
 
 
566 aa  447  1.0000000000000001e-124  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  47.51 
 
 
514 aa  446  1.0000000000000001e-124  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  45.93 
 
 
549 aa  439  9.999999999999999e-123  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  47.06 
 
 
565 aa  439  9.999999999999999e-123  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1487  methyl-accepting chemotaxis protein  49.8 
 
 
494 aa  433  1e-120  Burkholderia mallei ATCC 23344  Bacteria  normal  0.625343  n/a   
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.2 
 
 
543 aa  433  1e-120  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.44 
 
 
579 aa  417  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.25 
 
 
575 aa  416  9.999999999999999e-116  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_012912  Dd1591_0805  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.87 
 
 
511 aa  417  9.999999999999999e-116  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.49 
 
 
550 aa  417  9.999999999999999e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.73 
 
 
519 aa  412  1e-114  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1779  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.33 
 
 
517 aa  412  1e-114  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1618  methyl-accepting chemotaxis protein  43.81 
 
 
526 aa  409  1e-113  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1726  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.81 
 
 
526 aa  409  1e-113  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2845  methyl-accepting chemotaxis protein  43.81 
 
 
526 aa  409  1e-113  Yersinia pestis Angola  Bacteria  normal  normal  0.208852 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.56 
 
 
519 aa  407  1.0000000000000001e-112  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_012917  PC1_2292  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.95 
 
 
517 aa  405  1.0000000000000001e-112  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1744  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.27 
 
 
517 aa  401  9.999999999999999e-111  Dickeya dadantii Ech703  Bacteria  normal  0.514978  n/a   
 
 
-
 
NC_012917  PC1_3399  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.34 
 
 
511 aa  402  9.999999999999999e-111  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3559  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.15 
 
 
511 aa  396  1e-109  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  45.63 
 
 
519 aa  394  1e-108  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0839  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40 
 
 
511 aa  387  1e-106  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  70.79 
 
 
594 aa  388  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1802  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.89 
 
 
515 aa  380  1e-104  Dickeya zeae Ech1591  Bacteria  normal  0.0853497  n/a   
 
 
-
 
NC_011353  ECH74115_4385  aerotaxis receptor  39.39 
 
 
506 aa  380  1e-104  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.472426  normal 
 
 
-
 
NC_009436  Ent638_3527  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
506 aa  381  1e-104  Enterobacter sp. 638  Bacteria  normal  normal  0.538358 
 
 
-
 
NC_010658  SbBS512_E3508  aerotaxis receptor  39.2 
 
 
506 aa  379  1e-104  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  76.76 
 
 
613 aa  379  1e-104  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_010468  EcolC_0628  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.39 
 
 
506 aa  382  1e-104  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3538  aerotaxis receptor  39.39 
 
 
506 aa  381  1e-104  Escherichia coli E24377A  Bacteria  normal  0.840702  n/a   
 
 
-
 
CP001509  ECD_02941  fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component  39.02 
 
 
506 aa  377  1e-103  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0629  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.02 
 
 
506 aa  377  1e-103  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02891  hypothetical protein  39.02 
 
 
506 aa  377  1e-103  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2293  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.46 
 
 
517 aa  377  1e-103  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3253  aerotaxis receptor  39.02 
 
 
506 aa  377  1e-103  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3366  aerotaxis receptor  39.2 
 
 
506 aa  376  1e-103  Escherichia coli SMS-3-5  Bacteria  normal  0.775088  normal 
 
 
-
 
NC_012880  Dd703_3127  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.46 
 
 
515 aa  372  1e-102  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3477  aerotaxis receptor  40.42 
 
 
506 aa  374  1e-102  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3573  aerotaxis receptor  40.42 
 
 
506 aa  375  1e-102  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0352648  normal  0.227962 
 
 
-
 
NC_011149  SeAg_B3403  aerotaxis receptor  40.42 
 
 
506 aa  375  1e-102  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  68.77 
 
 
513 aa  373  1e-102  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3511  aerotaxis receptor  40.42 
 
 
506 aa  374  1e-102  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.00000000402751 
 
 
-
 
NC_011094  SeSA_A3407  aerotaxis receptor  40.42 
 
 
506 aa  373  1e-102  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.31 
 
 
520 aa  369  1e-101  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2593  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.81 
 
 
517 aa  368  1e-100  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_009436  Ent638_2094  methyl-accepting chemotaxis sensory transducer  38.96 
 
 
511 aa  369  1e-100  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  68.92 
 
 
615 aa  356  6.999999999999999e-97  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  68.92 
 
 
615 aa  356  6.999999999999999e-97  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  65.51 
 
 
605 aa  355  1e-96  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  68.35 
 
 
608 aa  355  2e-96  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  68.35 
 
 
608 aa  355  2e-96  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  66.56 
 
 
513 aa  353  4e-96  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  63.53 
 
 
600 aa  353  5e-96  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  56.76 
 
 
552 aa  352  1e-95  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  64.94 
 
 
522 aa  351  2e-95  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  64.94 
 
 
522 aa  351  2e-95  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  64.78 
 
 
570 aa  347  3e-94  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  65.29 
 
 
515 aa  347  4e-94  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  63.23 
 
 
559 aa  347  5e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  51.51 
 
 
585 aa  347  5e-94  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.97 
 
 
515 aa  344  2e-93  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007347  Reut_A2452  PAS  40.04 
 
 
518 aa  344  2.9999999999999997e-93  Ralstonia eutropha JMP134  Bacteria  normal  0.952184  n/a   
 
 
-
 
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