| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3682 |
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| Symbol | aer |
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| ID | 4040498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 220629 |
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| End bp | 222287 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979105 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_585823 |
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| Protein GI | 94312614 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0302709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA ACCAGCCAGT CACCCAGCGG GAGCATCCGC TTCCCCCGGA CGTCTACCTG
ATCTCGCGAA CCGACCTCAA GGGTCGTATC ACGTTCGCCA ATCGGACGTT CGTCGAGGTG
AGCGGATTCA CGTCCGACGA GCTGCTTGGC GCTGCCCACA ATCTCGTGCG ACATCCCGAC
ATGCCGCCCG AGGCCTTTGC CGATCTCTGG GATTCGCTGC AGGCGGGCAA GTCATGGGTG
GGCGTTGTGA AGAATCGCTG CAAGAACGGC GATCACTACT GGGTGCAGGC CACGGTCACG
CCGACACGCG TCGGCGACCG CGTCGTCGGC TATACGTCGG TGCGCTCGAT GGCCAGCCGC
GAACAGATCG GCGCGGCCGA CGCCGCATAT CGGCGCTTCC GCGAGAACCG GGCCGGCGGC
CTGGCGATTC GCGATGGCGC CGTGGTGCGT ACTGGCCTGG CAGGTCTGGT TGGCCGCGTG
ACGCGGATTA CCCTGAAGCG ACGCATCCTC TGGGCCCAGC TTGCGGGGCT GGTGTGGTTC
CTGGCGGCTA TCGCCGGCGT GCACTGGCTG GCAGAGGAGC AGGCCGCGCA ACTCTGGCCG
TGGCTGTGGG GCGCATTTGG ATTCGCGGTG CTCTCCTCGT TCATGGCGGG TTCGATGCTG
GTGTCGCGTG TCGAGCGCCC GGTGCGCGAG ATGCTGGACT TCGCGCTGCG TATGGGCGCG
GGCGATCTGA CGAGCAACTT CGAACACCGG TCAGCCGACG AAGTCGGCGA ACTGTCGCGT
GCCATGCGCA CGATGCAGCG CAGCCTGCAG TCGGTGGTCA ACGATATCCA GGGCGGCATG
GCCAGCATCT CGGCGGCCAC GCACCAGGTG GCCGCCGGCA ACAACGATCT CTCGCAGCGT
ACCGAGCAGC AGGCGGCGTC GCTCGAGGAA ACGGCTTCGA GCATGGAGCA GCTGACCAGC
ACGGTCCGGC AGAACGCCGA CAACGCGCAC CAGGCCACGC GGCTGGCGGC CGATGCCTCC
GAGACGGCCG TGCGCGGCGG TGAGGCGGTG GGGCGCGTGG TCCAGACGAT GGACGAGATC
AACGAGGCCT CGCGCAAGAT CGTCGACATC ATCGGCGTGA TCGAGGGCAT CGCGTTCCAG
ACCAACATCC TGGCGCTGAA CGCGGCGGTG GAAGCGGCGC GCGCGGCCGA GCAGGGCCGC
GGATTCGCGG TGGTGGCCGG CGAGGTGCGC AGCCTGGCGC AGCGCAGCGC CAATGCGGCC
AAGGAGATCA AGGGGCTGAT TGGCAATACC GTGGCGCGCG TGGAAAGCGG CGCGGAACAG
GTGAGTCAGG CTGGCGCCAC GATGGACGAG ATCGTGCAGG CCGTGAAGCG CGTGACCGAC
ATCATGGGTG AGATCAGTTC GGCATCGGCG GAACAGAGCG CAGGCATCGA GCAGGTGAAT
GAGGCGGTGA CGCAGATGGA CGATGTGACG CAGCAGAACG CTGCGCTGGT GGAGCAGGCC
GCTGCCGCGG CGGGCTCGCT CGAAGAACAG GCCGAGCGCC TGCGGGAGTC GATCTCCACG
TTCCGCGTGA GTATGCAGGC CGAGGTTCGG CCGCCGCGCA AGCGACAGGT GGCGACGATG
GGTGAAACGG GGAAAGAAGC CGGGCTGGTC AACGCCTGA
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| Protein sequence | MRNNQPVTQR EHPLPPDVYL ISRTDLKGRI TFANRTFVEV SGFTSDELLG AAHNLVRHPD
MPPEAFADLW DSLQAGKSWV GVVKNRCKNG DHYWVQATVT PTRVGDRVVG YTSVRSMASR
EQIGAADAAY RRFRENRAGG LAIRDGAVVR TGLAGLVGRV TRITLKRRIL WAQLAGLVWF
LAAIAGVHWL AEEQAAQLWP WLWGAFGFAV LSSFMAGSML VSRVERPVRE MLDFALRMGA
GDLTSNFEHR SADEVGELSR AMRTMQRSLQ SVVNDIQGGM ASISAATHQV AAGNNDLSQR
TEQQAASLEE TASSMEQLTS TVRQNADNAH QATRLAADAS ETAVRGGEAV GRVVQTMDEI
NEASRKIVDI IGVIEGIAFQ TNILALNAAV EAARAAEQGR GFAVVAGEVR SLAQRSANAA
KEIKGLIGNT VARVESGAEQ VSQAGATMDE IVQAVKRVTD IMGEISSASA EQSAGIEQVN
EAVTQMDDVT QQNAALVEQA AAAAGSLEEQ AERLRESIST FRVSMQAEVR PPRKRQVATM
GETGKEAGLV NA
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